Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  323 bits (829), Expect = 5e-93
 Identities = 184/421 (43%), Positives = 256/421 (60%), Gaps = 19/421 (4%)

Query: 12  GVGLMSGGLLCAPAQADFIKDSKADLDLKNYYFNRDYREDAG---QSKREEWAQGFILNL 68
           G+ L+S  LL A  +  F +DSKA L  +NYYF+RD+ +  G   QSK EEWAQGFIL+ 
Sbjct: 10  GLTLLSQPLLAA--EGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILDF 67

Query: 69  KSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEYSKYG 128
           KSG+T G VGFGVD +G+LG+KLDSSPDR+ +GLL    D          RA DEYS+  
Sbjct: 68  KSGYTPGPVGFGVDALGLLGIKLDSSPDRTNTGLLPVHGDG---------RAADEYSRLA 118

Query: 129 VTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTK 188
            T K R +++ELR+G L P+LP L  +  RL P T++G  ++S++I GL +  G +  T 
Sbjct: 119 PTFKARLSKTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTH 178

Query: 189 QRESTEYEDMGLTSQSGAYKST-AKSDRFRFAGGDYKLTPGMT-LSYHFAQLEDIYQQHF 246
            R   E  D  + +  G      A+SD F + GGDY      + +S  + QLEDIYQQ F
Sbjct: 179 LRN--EGGDGKMNAMLGHVPMRQAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGF 236

Query: 247 VGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQY 306
           VGLK+S  +G   L  ++ YF A + G  L G +DN+A  +     + GHS   GYQ  Y
Sbjct: 237 VGLKHSKPVGDWVLSANLGYFTAREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIY 296

Query: 307 GDTPFTYVDGTNTYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGDQA 366
           GD+PF  V    + L +E     F+ T+ER +  RYD++FAA+GVPGLT + R+  G+  
Sbjct: 297 GDSPFPRVFANISPLGNEVPTYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNNV 356

Query: 367 QVKGFAGEGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYLRDMNENRVIVGYTVAL 426
              G   EGR+ ERD+D+GY  QSG LKG+ +R RN ++++NY  D++ENR+ + YT  L
Sbjct: 357 DT-GLGYEGRDRERDLDIGYAVQSGALKGLGIRVRNAMARSNYRSDIDENRLTLVYTWQL 415

Query: 427 W 427
           +
Sbjct: 416 F 416