Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  333 bits (854), Expect = 6e-96
 Identities = 177/424 (41%), Positives = 253/424 (59%), Gaps = 28/424 (6%)

Query: 14  GLMSGGLLCAPAQADFIKDSKADLDLKNYYFNRDYREDAG---------QSKREEWAQGF 64
           GL+ G L  A A A FI+DSK  L L+N YFN ++R++ G         +S+R EWAQGF
Sbjct: 12  GLLCGWLPVAGA-AGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGF 70

Query: 65  ILNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEY 124
           +L+ +SGFT+GT+G GVD +G+LG++LDS   RSG+GLL   +D          RA DE+
Sbjct: 71  LLDYQSGFTQGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDG---------RAADEF 121

Query: 125 SKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQI 184
           +  G+T K R   + ++ G LLP  P L  N +RL PQT++GTQ+TSTDI  L L  G +
Sbjct: 122 ASAGITAKARLGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHL 181

Query: 185 DQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQ 244
           D+ KQR+S++   + L    G       S  F FAG DY ++  + LSY   +LE  Y+Q
Sbjct: 182 DRFKQRDSSDSTGLYLDGYGGP-----ASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQ 236

Query: 245 HFVGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQE 304
            F GL +   LGGG L TD+RYF +  SG    G +DN   S +  +++ GH++G GYQ 
Sbjct: 237 DFAGLVHDLPLGGGVLTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQV 296

Query: 305 QYGDTPFTYVDGTNTYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGD 364
             G+    Y+ G   Y FS   +  F +  E+ W A Y ++FAA GVPGLTF TR+  GD
Sbjct: 297 LDGEAGLPYISGATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGD 356

Query: 365 QAQVKGFAGEG-REWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYLRDMNENRVIVGYT 423
             +     GEG +EWERD ++ YV Q G LKG+ ++ RN + ++++ R  + NR+ + Y 
Sbjct: 357 NGR---SGGEGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYRSDFARGRDSNRLYLTYD 413

Query: 424 VALW 427
           +A+W
Sbjct: 414 IAIW 417