Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  406 bits (1043), Expect = e-118
 Identities = 205/422 (48%), Positives = 282/422 (66%), Gaps = 20/422 (4%)

Query: 8   LILKGVGLMSGGLLCAPAQADFIKDSKADLDLKNYYFNRDYRE--DAGQSKREEWAQGFI 65
           L L GV  MS        QA F +DS A  + +N YFNRD+R+   A QSKR+EWAQGFI
Sbjct: 26  LALAGVAPMS--------QAAFFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFI 77

Query: 66  LNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEYS 125
           LN +SG+T+GTVGFG+D +GMLG+KLDSSPDR+ SGLL   +D          +A DEYS
Sbjct: 78  LNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDG---------KAADEYS 128

Query: 126 KYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQID 185
           K G+TGKV+ +Q+EL+ G L+P+LPTLQPN  R+ PQTF G  +TS +I GL   GG+ID
Sbjct: 129 KLGLTGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRID 188

Query: 186 QTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQH 245
           + K R  T +ED+ L +++G +  T  +D     G DY+ T  +T SYHFAQL+DIY+QH
Sbjct: 189 KAKDRNDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQH 248

Query: 246 FVGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQ 305
           F+G+  +   G GTL  D+R   +D +GA  AG +DN  ++    ++  GH +   +Q+ 
Sbjct: 249 FIGMVATQPWGPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQL 308

Query: 306 YGDTPFTYVDGTNTYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGDQ 365
            G++ F YVDG + YL +  Q+++F+  +ER W ARYD++FAALGVPGLTF TR+  GD 
Sbjct: 309 SGESAFPYVDGADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDN 368

Query: 366 AQVKGFAGEGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYLRDMNENRVIVGYTVA 425
              +   GEG+EWER+ +L YV QSG LK V++R RN   ++N+ RD +E R++V Y+VA
Sbjct: 369 VS-RAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRSNFARDADEVRLLVSYSVA 427

Query: 426 LW 427
           LW
Sbjct: 428 LW 429