Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  225 bits (573), Expect = 2e-63
 Identities = 147/458 (32%), Positives = 216/458 (47%), Gaps = 57/458 (12%)

Query: 8   LILKGVGLMSGGLLCAPAQAD----FIKDSKADLDLKNYYFNRDYREDAGQSKR------ 57
           L L  V  +SG    +    D    FI+ S   +  +N+YFNRD R+    +        
Sbjct: 7   LYLAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNT 66

Query: 58  ----EEWAQGFILNLKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGS----GLLSRDNDA 109
               E WA   I    SGFT+GTVGFGVD   M+GLKLD+   R+G      +L  DN  
Sbjct: 67  NGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKG 126

Query: 110 TPGKPSYSKRAHDEYSKYGVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQV 169
                     A DEY+K G   KVR   + ++ G + P  P +    SRL P++FRG  V
Sbjct: 127 ---------EARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTV 177

Query: 170 TSTDIAGLALIGGQIDQTKQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGM 229
            +T I GL L GG++    Q  S+   D  +T     Y     S    + GGDY +    
Sbjct: 178 ENTSIQGLTLQGGRLHAMSQPVSSNLNDNFVT----FYGGPVNSPWIGYGGGDYSINDNW 233

Query: 230 TLSYHFAQLEDIYQQHFVG------LKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNR 283
           T+S + +QL+D++ Q++ G      L +  AL GG       Y+ A   G    G+ DN 
Sbjct: 234 TVSVYASQLKDVWNQYYAGTSVVYPLSDDLALIGG-----FNYYKAVDEGKKRLGEFDNN 288

Query: 284 ALSTRAMFSYKGHSLGGGYQEQYGDTPFTYV-DGTNTYLFSEYQLSNFSQTNERVWHARY 342
             S +    Y  H+L   +Q   GD  F Y+    + ++ +  Q S+F+   ER W  RY
Sbjct: 289 IWSAKVGVRYGAHTLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRY 348

Query: 343 DFDFAALGVPGLTFSTRWAKGDQAQVKGF-------------AGEGREWERDIDLGYVFQ 389
           D +F + G+PGLTF TR+A+G  A                      + WERD+++ YV Q
Sbjct: 349 DLNFTSYGIPGLTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQ 408

Query: 390 SGTLKGVSLRWRNGLSKAN-YLRDMNENRVIVGYTVAL 426
           +G  K +S R R   ++A  +  D++E RVI+ Y +++
Sbjct: 409 TGPAKDLSFRLRQATTRATAFESDLDETRVIIEYPLSI 446