Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  390 bits (1002), Expect = e-113
 Identities = 222/535 (41%), Positives = 326/535 (60%), Gaps = 19/535 (3%)

Query: 7   LLNVEHLKIRVGEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLP---- 62
           L++V+ L++  G  G   V  + F IA GE +ALVGESGSGKT+ A + + L+       
Sbjct: 12  LIDVKGLRVAFG--GKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADVTG 69

Query: 63  -MQVCGGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLH 121
             ++ G       RDL S+    LR IRG  I M+FQEPM +LN    +G Q++E L+LH
Sbjct: 70  EARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEVLELH 129

Query: 122 TDLDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADE 181
             L     +   + +L   GI    R   ++PHQ SGG RQR M+A  +  +P LL+ADE
Sbjct: 130 EALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLLLADE 189

Query: 182 PTTALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIE 241
           PTTALD   +  +++L+ +L  + G A+L I+HDL+LV R+A +VVVM +G  VE G++ 
Sbjct: 190 PTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEHGAVA 249

Query: 242 DILLAPKAEYTRQLLEALPRRGVLA-PLPVSNEPLVEVDQVCIEHPGPTT---FWGKRQH 297
            +  AP+  YTR+L+++ P R V A     +  P++E   + + +P P      W ++  
Sbjct: 250 PVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVIYPVPKPGIGGWFRKGE 309

Query: 298 TRVVHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVD--ILKAANR 355
              V  A   I PGETL +VG SGSGK+TL  + +GL+K   G+++  G D  + +A++ 
Sbjct: 310 FVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLKH-QGALKIAGKDWAVDRASDL 368

Query: 356 THRLQCQMIFQDPYSSLNPRMKIGEILAEPLR-HEPGLNAAERRERVTQTLKDIGLGE-- 412
             R   Q++FQDP+SSL+PRM + +I+ E LR H P L    RR R    L D+GL E  
Sbjct: 369 GLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSLAALADVGLTESQ 428

Query: 413 --QFVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQ 470
               ++R+PH+ SGGQRQR+AI RAL+  PQL++ DEP SALD+TIQKQ+L L +RLQ +
Sbjct: 429 FPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLLQRLQRE 488

Query: 471 YGFACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAAA 525
            G + L I+HD+  +  +AH+V VM  G ++E G  E++   P+HPYT++L+AAA
Sbjct: 489 RGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVLGAPEHPYTKKLVAAA 543