Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  560 bits (1443), Expect = e-164
 Identities = 289/536 (53%), Positives = 381/536 (71%), Gaps = 4/536 (0%)

Query: 7   LLNVEHLKIRVGEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVC 66
           L++VE L + VG  G   V ++SF IAPGE+V +VGESGSGKT AARA +GL P P+   
Sbjct: 11  LVSVEGLTLAVGMGGREIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRT 70

Query: 67  GGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHT-DLD 125
            GR+ F+G DL       LR +RGA +GMVFQEPM SLNP++ IG+Q+ EAL LH  DL 
Sbjct: 71  AGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRRDLS 130

Query: 126 PPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTA 185
           P   RER L ML R+GI+  +  L+++PH+FSGGMRQR+MLASVMLL PALLIADEPTTA
Sbjct: 131 PAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEPTTA 190

Query: 186 LDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILL 245
           LD + Q DV+ELM+ LTRE  TA+L ISHDL +VAR+  ++VVMRHG+ +E G  +D+L 
Sbjct: 191 LDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDDMLE 250

Query: 246 APKAEYTRQLLEALPRRGVLAPLPVSNEPLVEVDQVCIEHPGPTTFWGKRQHTRVVHSAS 305
            P+  YTR+LL+A+P R     +P    P+VEV  + +++ G    + K    R +H   
Sbjct: 251 QPRHAYTRELLQAMPHRLPARQVP-DEAPVVEVRNLVVDYAGHRRLFAKTVPKRALHGID 309

Query: 306 LVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILK--AANRTHRLQCQM 363
           LV+ P E +A+VGGSGSGKTTLGR++ GL++P  G I F+G  IL+  A    +RLQCQM
Sbjct: 310 LVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPILRSDAGWSDYRLQCQM 369

Query: 364 IFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQTLKDIGLGEQFVERFPHQLS 423
           +FQDPY+SL+PRM IG+++ E LR   G++ A+R  RV + L+++GLG  F  R+ H+LS
Sbjct: 370 VFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGFAPRYAHELS 429

Query: 424 GGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDLA 483
           GGQRQRVAI RA+VR P  VIADEP+SALD+T++ Q+L LF  LQ ++GF+CLFISHDL 
Sbjct: 430 GGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISHDLG 489

Query: 484 AVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAAASPLEQLPDGGYRIR 539
            VE++A RV VM  G +VE G+R+ +FD P   YTR+LL+A   LE    GG R+R
Sbjct: 490 VVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIPALEPTAGGGVRLR 545