Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 623 a.a., fused predicted peptide transport subunits of ABC superfamily: ATP-binding components (RefSeq) from Escherichia coli BW25113

 Score =  403 bits (1036), Expect = e-117
 Identities = 240/568 (42%), Positives = 340/568 (59%), Gaps = 44/568 (7%)

Query: 7   LLNVEHLKIRV--GEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLP-- 62
           +L VE+L I     +    AV +LSFS+  GE +A+VGESGSGK++ A A + LL     
Sbjct: 12  VLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGG 71

Query: 63  -MQVCGGRLDFQGRDLASVSTE---ALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEAL 118
            +Q     L  + R++  +S +    +R +RGA + M+FQEPM SLNP   +G+Q++E++
Sbjct: 72  LVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESI 131

Query: 119 KLHTDLDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLI 178
           +LH +    +       ML ++ I  A+  L  YPHQ SGGMRQR+M+A  +  RPA+LI
Sbjct: 132 RLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLI 191

Query: 179 ADEPTTALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQG 238
           ADEPTTALD   Q  +++L+  L +E    ++FI+HD+ +VA  A +V+VM  G+AVE G
Sbjct: 192 ADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETG 251

Query: 239 SIEDILLAPKAEYTRQLLEALPRRGVLAPLP-------------------------VSNE 273
           ++E I  AP+  YTR LL A+P+ G +  L                          V  E
Sbjct: 252 TVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGE 311

Query: 274 PLVEVDQVCIEHPGPTTFWGKRQHTRVVHSASLV---IAPGETLALVGGSGSGKTTLGRS 330
           P++ V  +    P  +    +   TR VH+   V   + PGETL+LVG SGSGK+T GR+
Sbjct: 312 PVLRVRNLVTRFPLRSGLLNRV--TREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRA 369

Query: 331 LVGLIKPCAGSIRFKG--VDILKAAN-RTHRLQCQMIFQDPYSSLNPRMKIGEILAEPLR 387
           L+ L++   G I F G  +D L     +  R   Q IFQDPY+SL+PR  IG+ + EPLR
Sbjct: 370 LLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLR 429

Query: 388 HEPGLNAAERRERVTQTLKDIGLGEQFVERFPHQLSGGQRQRVAIGRALVRHPQLVIADE 447
               L   +   RV   L+ +GL  +   R+PH+ SGGQRQR+ I RAL  +P+++IADE
Sbjct: 430 VHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADE 489

Query: 448 PISALDMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQGNVVEVGARE 507
            +SALD++I+ QI+ L   LQ  +G A LFISHD+A VERI+HRVAVM+ G +VE+G R 
Sbjct: 490 AVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRR 549

Query: 508 QIFDHPQHPYTRQLLAA---ASPLEQLP 532
            +F++PQHPYTR+LLAA   A P  Q P
Sbjct: 550 AVFENPQHPYTRKLLAAVPVAEPSRQRP 577