Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 529 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Enterobacter asburiae PDN3

 Score =  392 bits (1006), Expect = e-113
 Identities = 228/526 (43%), Positives = 319/526 (60%), Gaps = 10/526 (1%)

Query: 7   LLNVEHLKIRVGEHGPL--AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLP-M 63
           LL++++L I     G     V DLS  I PGE +ALVGESGSGK+++A + + LLP P +
Sbjct: 5   LLSIDNLSIAFSTQGETRTVVTDLSLQIQPGETLALVGESGSGKSVSALSILRLLPSPPV 64

Query: 64  QVCGGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTD 123
               G + F G  L       LR IRG  I M+FQEPMVSLNP   + +Q+ E L LH  
Sbjct: 65  SYPQGDILFHGSSLLHADEHTLRGIRGNKIAMIFQEPMVSLNPLHSLEKQLYEVLSLHRG 124

Query: 124 LDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPT 183
           +     R   L  L R GI+ A + L  +PHQ SGG RQR+M+A  +L RP LLIADEPT
Sbjct: 125 MRKEAARGEILDCLERTGIRNAAKRLNDFPHQLSGGERQRVMIAMALLTRPELLIADEPT 184

Query: 184 TALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDI 243
           TALD   Q  ++ L+ EL  E   ++LFI+H+LS+V + A  V VM++G+ VEQ S   +
Sbjct: 185 TALDVTVQAQILTLLRELRDELNMSLLFITHNLSIVRKLADSVAVMQNGRCVEQNSASTL 244

Query: 244 LLAPKAEYTRQLLEALPRRGVLAPLPVSNEPLVEVDQVCIEHPGPTTFWGK-RQHTRVVH 302
           L AP+  YT++LL++ P  G   PL   + PL+ V+ + +  P       +      V+ 
Sbjct: 245 LSAPQHPYTQRLLDSEP-SGDPVPLAADSTPLLRVEDLSVSFPIRKGILRRIVDQNPVLK 303

Query: 303 SASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILKAANRTH---RL 359
           +    + PGE+L LVG SGSGK+T G +L+ LI    G I F  + + +   R     R 
Sbjct: 304 NIRFSLRPGESLGLVGESGSGKSTTGLALLRLI-ASQGEIFFDDMPLHRWNRRQMLPVRP 362

Query: 360 QCQMIFQDPYSSLNPRMKIGEILAEPLR-HEPGLNAAERRERVTQTLKDIGLGEQFVERF 418
           + Q++FQDP SSLNPR+ + +I+ E LR H+PGL+A +R + V + + ++GL      R+
Sbjct: 363 RMQVVFQDPNSSLNPRLSVLQIIEEGLRVHQPGLSAQQREQEVMRVMAEVGLDAGTRHRY 422

Query: 419 PHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFI 478
           P + SGGQRQR+AI RAL+  P+L+I DEP S+LD T+Q QIL L + LQ ++  A +FI
Sbjct: 423 PAEFSGGQRQRIAIARALILKPELIILDEPTSSLDRTVQAQILALLKGLQEKHRLAYIFI 482

Query: 479 SHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAA 524
           SHDL  V  + H+V V+ QG VVE G  +++F  P   YTRQLL+A
Sbjct: 483 SHDLQVVRALCHQVIVLRQGEVVEQGECQRVFSAPTQRYTRQLLSA 528



 Score =  164 bits (414), Expect = 1e-44
 Identities = 106/271 (39%), Positives = 150/271 (55%), Gaps = 17/271 (6%)

Query: 273 EPLVEVDQVCIEHPGPTTFWGKRQHTRVVHSASLVIAPGETLALVGGSGSGKTTLGRSLV 332
           +PL+ +D + I       F  + +   VV   SL I PGETLALVG SGSGK+    S++
Sbjct: 3   QPLLSIDNLSI------AFSTQGETRTVVTDLSLQIQPGETLALVGESGSGKSVSALSIL 56

Query: 333 GLIK--PCA---GSIRFKGVDILKAANRTHR----LQCQMIFQDPYSSLNPRMKIGEILA 383
            L+   P +   G I F G  +L A   T R     +  MIFQ+P  SLNP   + + L 
Sbjct: 57  RLLPSPPVSYPQGDILFHGSSLLHADEHTLRGIRGNKIAMIFQEPMVSLNPLHSLEKQLY 116

Query: 384 EPLRHEPGLNAAERRERVTQTLKDIGL--GEQFVERFPHQLSGGQRQRVAIGRALVRHPQ 441
           E L    G+     R  +   L+  G+    + +  FPHQLSGG+RQRV I  AL+  P+
Sbjct: 117 EVLSLHRGMRKEAARGEILDCLERTGIRNAAKRLNDFPHQLSGGERQRVMIAMALLTRPE 176

Query: 442 LVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQGNVV 501
           L+IADEP +ALD+T+Q QIL L   L+ +   + LFI+H+L+ V ++A  VAVM  G  V
Sbjct: 177 LLIADEPTTALDVTVQAQILTLLRELRDELNMSLLFITHNLSIVRKLADSVAVMQNGRCV 236

Query: 502 EVGAREQIFDHPQHPYTRQLLAAASPLEQLP 532
           E  +   +   PQHPYT++LL +    + +P
Sbjct: 237 EQNSASTLLSAPQHPYTQRLLDSEPSGDPVP 267