Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

 Score =  394 bits (1013), Expect = e-114
 Identities = 232/529 (43%), Positives = 325/529 (61%), Gaps = 10/529 (1%)

Query: 1   MSANPVLLNVEHLKI--RVGEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGL 58
           MSA+P LL +  L I  R G      VD +S SI  GE +ALVGESGSGK++ A + + L
Sbjct: 1   MSAHP-LLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRL 59

Query: 59  LPLPMQV-CGGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEA 117
           LP P  V   G + F G  L + S + LR +RG  I M+FQEPMVSLNP   I +Q++E 
Sbjct: 60  LPSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEV 119

Query: 118 LKLHTDLDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALL 177
           L LH  +     R   +  L R+GI+ A R L  +PHQ SGG RQR+M+A  +L +P LL
Sbjct: 120 LSLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLL 179

Query: 178 IADEPTTALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQ 237
           IADEPTTALD   Q  +++L+ EL +E    +LFI+H+L++V R A +V VM+ G+ VEQ
Sbjct: 180 IADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQ 239

Query: 238 GSIEDILLAPKAEYTRQLLEALPRRGVLAPLPVSNEPLVEVDQVCIEHPGPTTFWGKRQH 297
               ++  AP+  YTRQLL A P  G   PL  +   L++V ++ +  P       +   
Sbjct: 240 NRTRELFSAPQHPYTRQLLNAEP-TGEAPPLEPTASTLLDVRELGVSFPIRRGLLRRTVG 298

Query: 298 TR-VVHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILKAANRT 356
            + V+ + S  +  GE++ LVG SGSGK+T G +L+ L++   G I F G  + +  ++ 
Sbjct: 299 EKSVLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLLR-SRGEIWFDGQPLHRFNHKQ 357

Query: 357 H---RLQCQMIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQTLKDIGLGEQ 413
               R + Q++FQDP  SLNPR+ + +I+AE LR    L+ AE+ +RV Q+++++GL   
Sbjct: 358 MLPVRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQRVIQSMQEVGLDPD 417

Query: 414 FVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGF 473
              R+P + SGGQRQR+AI RAL+  P+L+I DEP S+LD T+Q QIL L + LQ  +  
Sbjct: 418 SRHRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQL 477

Query: 474 ACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLL 522
           A LFISHDL  V  + H+V V+  G VVE G   Q+F+HPQ  YTRQLL
Sbjct: 478 AYLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526



 Score =  176 bits (446), Expect = 2e-48
 Identities = 116/276 (42%), Positives = 153/276 (55%), Gaps = 22/276 (7%)

Query: 270 VSNEPLVEVDQVCIEHPGPTTFWGKRQHTRVVHSASLVIAPGETLALVGGSGSGKTTLGR 329
           +S  PL+E+  + I       F    Q  +VV   SL I  GETLALVG SGSGK+    
Sbjct: 1   MSAHPLLEIRDLSI------AFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTAL 54

Query: 330 SLVGLIKP-----CAGSIRFKGVDILKAANRTHRL----QCQMIFQDPYSSLNPRMKIGE 380
           S++ L+         G I F G  +L A+ +  R     +  MIFQ+P  SLNP   I +
Sbjct: 55  SVLRLLPSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEK 114

Query: 381 ILAEPLRHEPGLNAAERRERVTQTLKDIGLGE--QFVERFPHQLSGGQRQRVAIGRALVR 438
            LAE L    G+     R  +   L+ +G+ +  + +  FPHQLSGG+RQRV I  AL+ 
Sbjct: 115 QLAEVLSLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLT 174

Query: 439 HPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQG 498
            P L+IADEP +ALD+T+Q QIL+L   L+ +     LFI+H+L  V R+A RVAVM  G
Sbjct: 175 QPDLLIADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAG 234

Query: 499 NVVEVGAREQIFDHPQHPYTRQLLAA-----ASPLE 529
             VE     ++F  PQHPYTRQLL A     A PLE
Sbjct: 235 RCVEQNRTRELFSAPQHPYTRQLLNAEPTGEAPPLE 270



 Score =  167 bits (423), Expect = 9e-46
 Identities = 98/245 (40%), Positives = 143/245 (58%), Gaps = 10/245 (4%)

Query: 13  LKIRVGEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVCGGRLDF 72
           L+  VGE   L    LSFS+  GE + LVGESGSGK+    A + LL        G + F
Sbjct: 293 LRRTVGEKSVLQA--LSFSLRRGESIGLVGESGSGKSTTGLALLRLLR-----SRGEIWF 345

Query: 73  QGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDPPQIRER 132
            G+ L   + + +  +R   I +VFQ+P  SLNP L + Q ++E L++H  L P +  +R
Sbjct: 346 DGQPLHRFNHKQMLPVR-RRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQR 404

Query: 133 CLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTALDCLAQL 192
            +  ++ +G+    R    YP +FSGG RQRI +A  ++L+P LLI DEPT++LD   Q 
Sbjct: 405 VIQSMQEVGLDPDSR--HRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQA 462

Query: 193 DVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILLAPKAEYT 252
            ++ L+  L +    A LFISHDL +V    H+V+V+RHG+ VEQG    +   P+ +YT
Sbjct: 463 QILTLLKTLQQTHQLAYLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYT 522

Query: 253 RQLLE 257
           RQLL+
Sbjct: 523 RQLLQ 527