Pairwise Alignments

Query, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

Subject, 293 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  231 bits (588), Expect = 2e-65
 Identities = 110/262 (41%), Positives = 164/262 (62%)

Query: 23  LIGGGLLVVLIALALMGLVWSPFDPLKIDLMSRFQAPSAAHWLGTDEFGRDVFSRLLIGA 82
           +IGG L  +L+  AL+  VW+P+ P  +D+ ++ QAP+ +HWLGTD FGRDV S LL+GA
Sbjct: 30  VIGGVLAALLLIAALVSFVWTPWSPYAMDMANKMQAPTGSHWLGTDAFGRDVASLLLVGA 89

Query: 83  RTSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTDRVLMMFNDALLAFPGILMALGIMAIIG 142
           R S+ V ++ V + ++ GT +G+LA   RGW +  +M  +D  LAFP IL A+ + A+ G
Sbjct: 90  RASILVGIIAVGIGLVVGTALGLLAAAKRGWVEEAVMRLSDFTLAFPAILSAIMMTAVFG 149

Query: 143 ASKYGIVLALGIAYTPSVVRVVRGTVLSLRELEYIEASRVIGNSELYTMLRHIAPNCLAP 202
           A     ++A+GI   P+  R+ R +  ++   EY+ A+R  G       ++H+ PN  A 
Sbjct: 150 AGIVNAIVAIGIYNIPTFARITRASANAIWSREYVAAARACGKGSFAITMQHVLPNISAV 209

Query: 203 LCVLATSMFGWALLSESALSFLGLGVPPPAATWGNMLASSRPYIASAPWLGVFPGLFICL 262
           L V  T  F  A+L+E+ALS+LGLG  PP  +WG ML+ ++  +   P L VFPG+ I L
Sbjct: 210 LIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTLMFQQPLLAVFPGMAIAL 269

Query: 263 TLLAINLFGDALRDRLDPRMRK 284
            +L +NL GD LRD LDPR+ +
Sbjct: 270 AVLGLNLLGDGLRDLLDPRLAR 291