Pairwise Alignments

Query, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

Subject, 278 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  374 bits (959), Expect = e-108
 Identities = 175/271 (64%), Positives = 228/271 (84%)

Query: 13  RRRVWAPANALIGGGLLVVLIALALMGLVWSPFDPLKIDLMSRFQAPSAAHWLGTDEFGR 72
           +R+   P NALIG  ++ +++A AL+ LVW+P DPL+I+  +R + P  A  LGTDEFGR
Sbjct: 5   KRKKRIPLNALIGIVIVGLIVAAALVSLVWTPHDPLRINFGARLKLPGGAFLLGTDEFGR 64

Query: 73  DVFSRLLIGARTSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTDRVLMMFNDALLAFPGIL 132
           D  SRL+ GA TS+W+++LTV  +++ G+++G+L G+LRGWTDR++M FN+ALLAFPG+L
Sbjct: 65  DELSRLMAGAATSVWIAVLTVGFSIVVGSIVGVLTGFLRGWTDRIVMAFNNALLAFPGLL 124

Query: 133 MALGIMAIIGASKYGIVLALGIAYTPSVVRVVRGTVLSLRELEYIEASRVIGNSELYTML 192
           +ALG++A++GA++YGIVLALG+AYTPSV R+VRGTVLSLRE E+IE+SRV+GNSELYTM+
Sbjct: 125 LALGLLAVVGANQYGIVLALGLAYTPSVTRIVRGTVLSLREKEFIESSRVLGNSELYTMV 184

Query: 193 RHIAPNCLAPLCVLATSMFGWALLSESALSFLGLGVPPPAATWGNMLASSRPYIASAPWL 252
           RH+ PNC APL VLATSMFGW +L+ESALSFLGLGVPPPA TWGNMLAS+RP++A A +L
Sbjct: 185 RHVLPNCTAPLTVLATSMFGWVILAESALSFLGLGVPPPAPTWGNMLASARPFMAQASYL 244

Query: 253 GVFPGLFICLTLLAINLFGDALRDRLDPRMR 283
            + PGL I LTLL INL GDA+RD LDPRM+
Sbjct: 245 SILPGLCIALTLLGINLLGDAVRDWLDPRMK 275