Pairwise Alignments

Query, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

Subject, 303 a.a., predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  218 bits (555), Expect = 1e-61
 Identities = 108/263 (41%), Positives = 163/263 (61%), Gaps = 1/263 (0%)

Query: 22  ALIGGGLLVVLIALALMGLVWSPFDPLK-IDLMSRFQAPSAAHWLGTDEFGRDVFSRLLI 80
           A+     +++LI +A+     +P+D     D  +    PS  HW G D  GRD+FSR+L+
Sbjct: 40  AMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLV 99

Query: 81  GARTSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTDRVLMMFNDALLAFPGILMALGIMAI 140
           GA+ SL   +  V +    GTL+G+LAGY  GW DR++M   D L AFPGIL+A+ ++A+
Sbjct: 100 GAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAV 159

Query: 141 IGASKYGIVLALGIAYTPSVVRVVRGTVLSLRELEYIEASRVIGNSELYTMLRHIAPNCL 200
           +G+    +++A+ I   P+  R+VRG  L L++  +IE++R IG S++  +LRHI P  +
Sbjct: 160 LGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLLRHILPGTV 219

Query: 201 APLCVLATSMFGWALLSESALSFLGLGVPPPAATWGNMLASSRPYIASAPWLGVFPGLFI 260
           + + V  T   G +++S ++LSFLGLG  PP   WG ML  +R  +  AP + VFP L I
Sbjct: 220 SSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAI 279

Query: 261 CLTLLAINLFGDALRDRLDPRMR 283
            LT+LA NL GD LRD LDP+++
Sbjct: 280 FLTVLAFNLLGDGLRDALDPKIK 302