Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 336 a.a., dipeptide ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  233 bits (593), Expect = 6e-66
 Identities = 127/333 (38%), Positives = 193/333 (57%), Gaps = 21/333 (6%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDM-ADPQSLADMRHTLGLDH 59
           M  FI ++L + +PT   I+++ FALIR+IPGDP  +M+G+   DP+  A     LGL+ 
Sbjct: 1   MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 60  SLVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLI 119
            L  Q+L +   +   DLG S+ T+ +V       F  +  + + A+LFA ++ +  G+I
Sbjct: 61  PLYAQYLDYVGKLAQGDLGESLRTRTSVWTEFTALFPATLELSMAALLFAGILGLLAGVI 120

Query: 120 AAWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSF--------- 170
           AA K+ S  D G++ I+    S+P FW GL+L+  F + LGW PV G +           
Sbjct: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPRTG 180

Query: 171 -----------SQAPWQAMSYMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAK 219
                        A W A+ +++LP + L  + +  I RM R+S +EVLR +YI  A+AK
Sbjct: 181 FMLIDTLLADEPDAFWDALHHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAKAK 240

Query: 220 GLSERAVLWKHALPNAFAPTWTLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDY 279
           GLS   V++ H L NA  P  T+VGL +G LL G  + ET+F+ PGIG+ +++AI ARDY
Sbjct: 241 GLSPARVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY 300

Query: 280 PVLQGCLLLITFIYVLVNLCVDLLYPLFDPRVK 312
           PV+Q  +LLI  + +LVN  VD+LY   +PR++
Sbjct: 301 PVVQNGILLIACLVILVNFVVDILYGFANPRIR 333