Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  427 bits (1098), Expect = e-124
 Identities = 208/311 (66%), Positives = 251/311 (80%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60
           MLRF++++L  A PTL +    VF LIRLIPGDPA L+LGD AD  SLAD+   LGLD  
Sbjct: 1   MLRFVVRRLLAAAPTLFISGAAVFFLIRLIPGDPAALLLGDQADAASLADLHRRLGLDQG 60

Query: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120
           L TQF +WF+ +L  DLG SI T + VL L++D F VSA IV VAV  A  IAVP G++A
Sbjct: 61  LPTQFSLWFQRMLHGDLGQSIRTGEPVLSLVIDHFVVSARIVFVAVALAAAIAVPAGMLA 120

Query: 121 AWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSY 180
           AW+QN  LD+GLVS AT+LLSIPSFWLGL+LL+ FG++LGWLPV+GYV FS+ P  A++Y
Sbjct: 121 AWRQNGKLDIGLVSAATVLLSIPSFWLGLMLLYLFGLELGWLPVIGYVDFSEDPVAALTY 180

Query: 181 MVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTW 240
           MVLPV TL L E G + RMARAST+EVLRL+YI +AR+KGLSE AVLW+HA  NAF PTW
Sbjct: 181 MVLPVATLVLHETGILIRMARASTLEVLRLDYITYARSKGLSEGAVLWRHAFRNAFGPTW 240

Query: 241 TLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCV 300
           TL+GL+LGNLLGGIAV+ETVFT+PG+GRL+VD+IF RDYPV+QGCLL + F+YVL+NL V
Sbjct: 241 TLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDSIFGRDYPVIQGCLLFVAFVYVLINLVV 300

Query: 301 DLLYPLFDPRV 311
           DLLYPLFDPRV
Sbjct: 301 DLLYPLFDPRV 311