Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 316 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  233 bits (594), Expect = 4e-66
 Identities = 114/312 (36%), Positives = 198/312 (63%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60
           M  F+ ++LA  + TL+  SV+VF ++ ++PG+ A +++G  A P+++A +   LGLD  
Sbjct: 1   MSLFLFKRLATLIGTLIGASVIVFLVLEILPGNAAQMLMGPDASPEAVAALATKLGLDQP 60

Query: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120
             T++  W   +L+ +LG S +    VL LIL+R +++  + L+A+ F T+IA+ +G+ A
Sbjct: 61  AWTRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTA 120

Query: 121 AWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSY 180
           A + N   D+GL+ +A + ++IP+FW  +LL+  F ++L W    G+  +    +  +  
Sbjct: 121 AARHNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFSGIKS 180

Query: 181 MVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTW 240
           ++LP ++L +V+   + R+ R++ +EV+R +++  ARAKG+S+R VLW H L NA  P  
Sbjct: 181 LLLPALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVI 240

Query: 241 TLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCV 300
           T++G+    LL G  V+E VF LPG+GRL+  AI  RD  V++ C++L+  + V+VN  V
Sbjct: 241 TVMGMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMLLAAMVVIVNFVV 300

Query: 301 DLLYPLFDPRVK 312
           D+LY + DPR+K
Sbjct: 301 DVLYAVIDPRIK 312