Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  413 bits (1062), Expect = e-120
 Identities = 207/311 (66%), Positives = 249/311 (80%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60
           M RF   ++AMA+PTLL+++V VF LIRLIPGDPA L+LGD+A P SLA++R  LGLD S
Sbjct: 1   MFRFAASRIAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGDLATPASLAELRARLGLDRS 60

Query: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120
           +  QF IWF  VL  DLG SI++ Q VL L+ +RF +S  IVLVAV  A ++AVP G+IA
Sbjct: 61  VPAQFGIWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGMIA 120

Query: 121 AWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSY 180
           AWKQN A DL LV  ATLL+SIP+FWLGLLLL  FG++LGWLPVVGYV  S+     + Y
Sbjct: 121 AWKQNRAPDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNGLLY 180

Query: 181 MVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTW 240
           ++LPV+TL L E+G + RMARAST+EVLRL+YI HARAKGLSERAVL +HA  NAF PTW
Sbjct: 181 LLLPVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFGPTW 240

Query: 241 TLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCV 300
           TL+GL+LGNLLGGIAV+ETVFT+PG+GRL+VDAIFARDYPV+QGCLL +  IYV VNL +
Sbjct: 241 TLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVNLVI 300

Query: 301 DLLYPLFDPRV 311
           DL YP FDPRV
Sbjct: 301 DLCYPFFDPRV 311