Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  232 bits (592), Expect = 8e-66
 Identities = 130/333 (39%), Positives = 194/333 (58%), Gaps = 21/333 (6%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDM-ADPQSLADMRHTLGLDH 59
           ML FI ++L + +PT   I+++ FALIRLIPGDP  +M+G+   DP+  A     LGL+ 
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 60  SLVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLI 119
            L  Q+L +   +   DLG S+ T+++V    L  F  +  +   A+LFA ++ +  G+I
Sbjct: 61  PLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVI 120

Query: 120 AAWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSF--------- 170
           AA K+ S  D G++ I+    S+P FW GL+L+  F + LGW PV G +           
Sbjct: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTG 180

Query: 171 -----------SQAPWQAMSYMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAK 219
                        A   A+ +++LP + L  + +  I RM R+S +EVLR +YI  ARAK
Sbjct: 181 FMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAK 240

Query: 220 GLSERAVLWKHALPNAFAPTWTLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDY 279
           GLS   V++ H L NA  P  T+ GL +G LL G  + ET+F+ PGIG+ +++AI ARDY
Sbjct: 241 GLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY 300

Query: 280 PVLQGCLLLITFIYVLVNLCVDLLYPLFDPRVK 312
           PV+Q  +LLI  + +LVN  VD+LY L +PR++
Sbjct: 301 PVVQNGILLIACLVILVNFVVDILYGLANPRIR 333