Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 314 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  208 bits (530), Expect = 1e-58
 Identities = 115/315 (36%), Positives = 184/315 (58%), Gaps = 11/315 (3%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPAL--LMLGDMAD-PQSLADMRHTLGL 57
           MLR++L++  + +P +L  SV++F ++RL  GDPAL  L L ++   P+ LA  R  LGL
Sbjct: 1   MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGL 60

Query: 58  DHSLVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIG 117
           D  L  Q+  W    L  D G S ++++ VL  +L+    +  +   A++   L +VP+G
Sbjct: 61  DQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLG 120

Query: 118 LIAAWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQA 177
           + AA  ++   D  +  IA L +S+P+FWL  LL+ AF + L WLP +GY       WQ 
Sbjct: 121 IWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGY-----GGWQ- 174

Query: 178 MSYMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFA 237
             +++LP V++  + +    R+ RAS ++V    ++  AR +GL+++    +H L NA  
Sbjct: 175 --HIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQTERRHILRNASL 232

Query: 238 PTWTLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVN 297
           P  T VG+ +G L+GG  ++E +F  PG+GR  V AIF RDYPV+Q   L++  ++V+ N
Sbjct: 233 PMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVVCN 292

Query: 298 LCVDLLYPLFDPRVK 312
           L VDLL    DPR++
Sbjct: 293 LIVDLLNAALDPRIR 307