Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  130 bits (328), Expect = 9e-35
 Identities = 138/550 (25%), Positives = 224/550 (40%), Gaps = 66/550 (12%)

Query: 13  LALGAGLAQAETALRVGLNADIRSTEPG-----VNRDENTDTVMLHIVEGLVAHREDASV 67
           L   A  AQA T L           +PG      + D + +T+   + +     R   +V
Sbjct: 15  LMAAAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNRLTQ---FERGGTAV 71

Query: 68  GPLLAREVKRSDDGMTYTFTLRDRVHFQNGA------TLTAQDVKWTWERYLNPKTQWRC 121
            P LA     S DG+TYTF LRD V F   +      T  A DV +T+ R +N    +R 
Sbjct: 72  IPGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFNRMINKDDPFRK 131

Query: 122 L--AEF----DGRGGAKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCGGSGILHPDSL 175
               EF    D      I  I+  D  TV F L      F+ ++A          +   L
Sbjct: 132 AYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFASIQSAEYAAQL 191

Query: 176 AADGSW----KAPIGTGPFSLGEWKPGQYVVLSRFKDYSPRDDAGPDGFTGKKTALVDAV 231
             +G      + PIGTGPF    ++    +  +  KDY   +D             +D +
Sbjct: 192 LKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVK-----------IDNL 240

Query: 232 RFMVIPDPSSAKAALMSNNIDLLPNVSASDAQELKSTPGVQISFSPIMAICGLLFQTNDP 291
            F +  DPS     L  N   +      +D + L     +++       +  + +   D 
Sbjct: 241 IFAITTDPSVRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAYNVMDK 300

Query: 292 L--------LKDVRIRQAIAHSLDYGQMVTALSNGTSEPNNSAIPQTSPFYSATAKQGYR 343
           +        L D+R+RQA+  S++  Q++ ++  G  +   +A+P T   Y  T K   +
Sbjct: 301 VKGSDQPNPLADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDA-K 359

Query: 344 YDPQEAQRLLKEAGYH--------GQPIKMIVNKRYSQMFDMGLLSQAMAVASGLNIQME 395
           YDP++A+ LLKEAG            P++   N     M +M    Q      GLN+++ 
Sbjct: 360 YDPEKAKSLLKEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEM---LQNDWKKIGLNVKIT 416

Query: 396 TLEWGTQLERYQSGNYQMMAFSYSSR-------LDPATSFDSLMGDKTKEPRKVWDNPQA 448
           + EWG  ++R + G  Q M   +S         L+     DSL G+   +    W + + 
Sbjct: 417 SYEWGEYIKRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLSGNNFSK----WCDKKF 472

Query: 449 QAVLRDAVRESDTAKRQALFDQLHTMMIHDTPMVIIYNGTVAAALRDSVKGFHSWPVSSP 508
             ++++A   SD AKR  L+ Q   ++    PM  I + TV   +R +V+ F   P    
Sbjct: 473 DGIVKEAKATSDVAKRTELYKQAQHILKDAVPMTPIAHSTVYQPMRSTVQDFKISPFGLN 532

Query: 509 RLWGVSLAAQ 518
             +GVS++ +
Sbjct: 533 SFYGVSVSGK 542