Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  124 bits (310), Expect = 1e-32
 Identities = 137/540 (25%), Positives = 221/540 (40%), Gaps = 65/540 (12%)

Query: 13  LALGAGLAQAETALRVGLNAD--IRSTEPG------------VNRDENTDTVMLHIVEGL 58
           L L A +A A  ++ +G++A   +  TE              V  D   +T+   +V+  
Sbjct: 4   LPLQAAMAAALLSVAIGVSAKPLVVCTEASPEGFDPVLYTTAVTADAAAETMFNRLVDFK 63

Query: 59  VAHREDASVGPLLAREVKR-SDDGMTYTFTLRDRV------HFQNGATLTAQDVKWTWER 111
               E   V P LA+++   S DG+TYTF LRD +      +F+    + A DV W+++R
Sbjct: 64  PGTTE---VVPALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQR 120

Query: 112 YLNPKTQWRCLA-----EFDGRGGAKIT-GIDTPDPLTVVFHLDQPSGLFLASMARPDCG 165
            L+P   W   +      F+  G  ++   ++  D  TVVF L +P   FLA +      
Sbjct: 121 QLDPNHPWHKKSLVGYPYFESMGFKELLKSVEKTDDHTVVFTLTRPEAPFLADLGMAFSS 180

Query: 166 GSGILHPDSLAADGSWK----APIGTGPFSLGEWKPGQYVVLSRF-KDYSPRDDAGPDGF 220
                + D L   G  +     PIGTGPF           V +R+ KD   R  A PD F
Sbjct: 181 IHSKEYADQLLKSGKTEDLNAKPIGTGPF-----------VFTRYQKDAQARFKANPDYF 229

Query: 221 TGKKTALVDAVRFMVIPDPSSAKAALMSNNIDLLPNVSASDAQELKSTPGVQISFSPIMA 280
            GK    VD +   +  D +     L +N   +       D   +K  P +++     M 
Sbjct: 230 RGKPA--VDPLILAISTDNNVRLQKLKANECQIALFPKPDDIPSIKKDPNLKVDELAAMT 287

Query: 281 ICGLLFQTNDPLLKDVRIRQAIAHSLDYGQMVTAL-SNGTSEPNNSAIPQTSPFYSATAK 339
                  T    + D R+R AI  + D      AL   G +       P T   ++   K
Sbjct: 288 TSYTALNTTHKYMSDARVRHAINIAFDKAGYTEALFGKGNAVVGTGPYPPTLLGFNEKLK 347

Query: 340 QGYRYDPQEAQRLLKEAGY-HGQPIKMIVNKRYSQMFDMGLLS----QAMAVASGLNIQM 394
              R D  +A+ LLKEAG   G    +             +L     QA     GL + +
Sbjct: 348 NPPR-DLDKARALLKEAGVPEGTEFTLFTRNGGGPTNPNPMLGAQRMQADLAQIGLKVNI 406

Query: 395 ETLEWGTQLERYQSGNYQMMAFSY-------SSRLDPATSFDSLMGDKTKEPRKVWDNPQ 447
           + +EWG  L+R ++G + M++  +        + L P  S D+    K  E    W N +
Sbjct: 407 KVMEWGEMLKRAKNGEHDMVSAGWVGDNGDPDNFLTPNLSCDAA---KNGENYARWCNKE 463

Query: 448 AQAVLRDAVRESDTAKRQALFDQLHTMMIHDTPMVIIYNGTVAAALRDSVKGFHSWPVSS 507
            Q ++  A   ++ A+R AL++Q   +   D P + +    +  A+R +V+GF   P+ +
Sbjct: 464 FQDLIDKARAIAEPAQRAALYEQAQDVFDKDQPWLPMAYPKLFTAMRKNVEGFTQSPLGT 523