Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  132 bits (333), Expect = 2e-35
 Identities = 126/508 (24%), Positives = 218/508 (42%), Gaps = 26/508 (5%)

Query: 3   RLLNGTLCVTLALGAGLAQAETALRVGLNADIRSTEPGVNRDENTDT-VMLHIVEGLV-A 60
           +LL        +L AGLAQA   L +G   D  + +P +   +N DT V  ++ + LV  
Sbjct: 7   KLLAAATLTAWSLTAGLAQAAGVLTIGCREDSTTFDP-IKSAQNRDTWVFANVYDTLVRV 65

Query: 61  HREDASVGPLLAREVKRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWTWERYLNPKTQ-W 119
                 + P LA     S DG+TYTF LRD   F +G+ +TA D  ++  R  + K   W
Sbjct: 66  DNLGTKMEPGLAESWDISKDGLTYTFKLRD-AKFSDGSAITADDAAFSLLRIRDNKASLW 124

Query: 120 RCLAEFDGRGGAKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCGGSGILHPDSLAADG 179
                F+    AK +     DP T+V  L  P+  FL+ +A P            +  D 
Sbjct: 125 A--DPFNLINTAKAS-----DPKTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKMGEDA 177

Query: 180 SWKAPIGTGPFSLGEWKPGQYVVLSRFKDYSPRDDAGPDGFTGKKTALVDAVRFMVIPDP 239
             + P+ +G F++ EW+ G  V+L +           P+ +  K  +L D V ++ + D 
Sbjct: 178 YSENPVTSGAFTVDEWRKGDRVILKK----------NPNFWQAKNVSL-DGVEWVSVTDD 226

Query: 240 SSAKAALMSNNIDLLPNVSASDAQELKSTPGVQISFSPIMAICGLLFQTNDPLLKDVRIR 299
           ++    + +N +D    V  S  +ELK    V I   P      LL      LL    +R
Sbjct: 227 NTRMRMVQNNELDTAIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEVR 286

Query: 300 QAIAHSLDYGQMVTALSNGTSEPNNSAIPQTSPFYSATAKQGYRYDPQEAQRLLKEAGYH 359
           QA+  ++D   +V   + G      S IP+ S ++ A   Q   YDP  A++LL++AG  
Sbjct: 287 QALDMAIDKQSLVKTATYGQGTVAYSYIPKGSLYHYANNLQ-RPYDPTAAKKLLEQAGAK 345

Query: 360 GQPIKMIVNKRYSQMFDMGLLSQAMAVASGLNIQMETLEWGTQLERYQSGNYQMMAFSYS 419
              +  +VN        + ++ +      G+   ++ ++     +    G Y +    ++
Sbjct: 346 DLKLNYVVNAGNEADEQIAVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYDISVMYWT 405

Query: 420 SR-LDPATSFDSLMGDKTKEPRKV-WDNPQAQAVLRDAVRESDTAKRQALFDQLHTMMIH 477
           +  LDP      ++G  T +     + N + +A++  A  E+D  KR+ ++ +L  +   
Sbjct: 406 NDILDPDQKTTFVLGHDTNQNYMTRYKNDKVKALVAQARIEADPVKREQMYVELQKLAKQ 465

Query: 478 DTPMVIIYNGTVAAALRDSVKGFHSWPV 505
           D   + +Y        R +V  F   P+
Sbjct: 466 DVNWIDLYYSPYINISRKNVSNFLQNPL 493