Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  124 bits (310), Expect = 1e-32
 Identities = 114/452 (25%), Positives = 197/452 (43%), Gaps = 45/452 (9%)

Query: 54  IVEGLVAHREDASVGPLLAREVKRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWT--WER 111
           IVEGL+ +  D    PLLA    +S DG+ YTF LR  V + +G   T+ DV ++    +
Sbjct: 65  IVEGLLTYDYDLKPKPLLATAWSQSKDGLQYTFELRKGVKWHDGKDFTSADVAFSILTLK 124

Query: 112 YLNPKTQWRCLAEFDGRGG-AKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCG--GSG 168
            ++P+          GRG  A +  + TPD  T V  L +PS   L ++A  +       
Sbjct: 125 QVHPR----------GRGTFANVVDVKTPDANTAVIVLSKPSPFLLTALASTESPIVPKH 174

Query: 169 ILHPDSLAADGSWKAPIGTGPFSLGEWKPGQYVVLSRFKDYSPRDDAGPDGFTGKKTALV 228
           +     +A++    AP+GTGPF   EW  G +++L R  +Y             K    +
Sbjct: 175 LYEGTDIASNKYNSAPVGTGPFVFKEWVQGSHIILERNPNY-----------WDKPKPYL 223

Query: 229 DAVRFMVIPDPSSAKAALMSNNIDL---LPNVSASDAQELKSTPGVQIS--FSPIM-AIC 282
           D V    + D ++  AAL S   DL      +  SD +     PGVQI    SP + +  
Sbjct: 224 DRVVVRFVLDSAARAAALESGAADLANGTGGIPLSDVERFGKLPGVQIDTRISPYLGSHQ 283

Query: 283 GLLFQTNDPLLKDVRIRQAIAHSLDYGQMVTALSNGTSEPNNSAIPQTSPFYSATAKQGY 342
            + F  + P L+ + +R+AIA ++D       +  G    + S I +    Y   + Q Y
Sbjct: 284 QIYFNLDTPALQKLEVRRAIAQAIDVNAFAKTVWYGYGTLSASPIGKGISRYHDASIQPY 343

Query: 343 RYDPQEAQRLLKEAGYH----GQPIKM-IVNKRYSQMFDMGLLSQAMAVASGLNIQMETL 397
            ++P+EA+  L  AG+     G  +K+ ++   + +      + Q++    G++  +E+ 
Sbjct: 344 PFNPKEAEAALDAAGFKRGAGGTRLKLRVLYNPFQERRAADFVRQSLG-RIGIDATVESY 402

Query: 398 EWGTQLER-YQSGNYQMMAFSYSSRLDPATSFDSLMGDKTKEPRKVWD------NPQAQA 450
           ++ T + + Y    + +   S ++  DP      +   K  +    +       NP+   
Sbjct: 403 DFATYVTKAYTDRAFDITLESLTNLFDPTVGVQRVFWSKNFKVGLPFSNAAHYVNPEVDR 462

Query: 451 VLRDAVRESDTAKRQALFDQLHTMMIHDTPMV 482
           +L  A  E D  KR+ LF     ++  D P +
Sbjct: 463 LLEAAAVEVDEGKRRQLFVDFQNIVHRDIPSI 494