Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 9e-32
 Identities = 113/396 (28%), Positives = 172/396 (43%), Gaps = 34/396 (8%)

Query: 25  ALRVGLNADIRSTEPGVNRDENTDTVMLHIV-EGLVAHREDASVGPLLAREVKRSDDGMT 83
           AL +GL  +    +P          V+L+ V E L     D  V PLLA   + S D  T
Sbjct: 32  ALVIGLTLEPTGLDPTAKAGAEIAEVVLYTVFETLTKINSDGGVTPLLAESWEVSPDLKT 91

Query: 84  YTFTLRDRVHFQNGATLTAQDVKWTWERYLNPKTQWRCLAEFDGRGGAKITGIDTP--DP 141
           YTF LR  V FQNG    AQ VK++++R           A    +     T I T   D 
Sbjct: 92  YTFKLRRGVKFQNGEPFNAQSVKFSFDR--------AAAANSTNKDKRTFTNIATQVVDE 143

Query: 142 LTVVF--HLDQPSGLFLASMARPDCGGSGILHPDSLAADGSWKAPIGTGPFSLGEWKPGQ 199
            TVV      +P  LFL   A      + ++ P S+  + +   P+GTGP+ L  W  G 
Sbjct: 144 HTVVLINKEIEPDLLFLLGQA-----SAILVEPKSVETNAT--KPVGTGPYRLDNWAKGS 196

Query: 200 YVVLSRFKDYSPRDDAGPDGFTGKKTALVDAVRFMVIPDPSSAKAALMSNNIDLLPNVSA 259
            +VL+++           DG+ G  T  +    F  I +P++  AAL+SN+IDL P+ S 
Sbjct: 197 SIVLAKW-----------DGWRGADTVQIRKATFRFISEPAAQTAALLSNDIDLFPHASV 245

Query: 260 S-DAQELKSTPGVQISFSPIMAICGLLFQTNDPLLKDVRIRQAIAHSLDYGQMVTALSNG 318
           S    + ++    QI F+  +    L        L DVR+R+AI+ ++D   ++ A  +G
Sbjct: 246 SRSLSQFQNDKRFQIVFNASLGKTILAINNKRKPLDDVRVRRAISAAIDRKAVIDAAVDG 305

Query: 319 TSEPNNSAIPQTSPFYSATAKQGYRYDPQEAQRLLKEAGYHGQPIKMIVNKRYSQMFDMG 378
              P  S      P Y  T      Y+ ++A++LL EAG        +V          G
Sbjct: 306 RGVPIGSHYVPGLPGYVDTTGVN-PYNIEKAKKLLAEAGVKTPLELELVLPPPPYARQGG 364

Query: 379 LLSQAMAVASGLNIQMETLEWGTQLE-RYQSGNYQM 413
            L  A     G+  +++ +EW   +   Y + NY +
Sbjct: 365 ELIAAQLAKIGIVAKIQNVEWAQWISGTYGNKNYDL 400