Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  120 bits (301), Expect = 1e-31
 Identities = 114/452 (25%), Positives = 207/452 (45%), Gaps = 47/452 (10%)

Query: 54  IVEGLVAHREDASVGPLLAREVKRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWTWERYL 113
           I +GL+ +  + S  P LA+E   S DG+ Y F L+    F +G  +T+ DV+++  R  
Sbjct: 66  IYDGLLTYDYELSPKPSLAKEWSVSADGLEYVFHLQPNAKFHDGKPVTSADVEFSILRLK 125

Query: 114 NPKTQWRCLAEFDGRGGAKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCG--GSGILH 171
               + R  A F     A +  IDT +PL     L +P+   + ++A  +       I  
Sbjct: 126 EAHPRGR--ATF-----ANVESIDTSNPLVAKVKLSKPAPGLITALASSESPVVPKHIFE 178

Query: 172 PDSLAADGSWKAPIGTGPFSLGEWKPGQYVVLSRFKDY--SPRDDAGPDGFTGKKTALVD 229
                 +      IG+GPF L EW PG +++L +  +Y  +PR               +D
Sbjct: 179 TFKPTDNPKPAQIIGSGPFVLKEWVPGSHILLEKNANYWDAPR-------------PYLD 225

Query: 230 AVRFMVIPDPSSAKAALMSNNIDLLPN-VSASDAQELKSTPGVQISFSPIMAICG----L 284
            V   +I D  +  AAL +   D+ PN V+ +D + LKS P +++    I A  G    L
Sbjct: 226 RVIIRLINDAGARAAALETGEGDIGPNPVALADLERLKSIPTLKVD-DRIYAYAGQQNQL 284

Query: 285 LFQTNDPLLKDVRIRQAIAHSLDYGQMVTALSNGTSEPNNSAI-PQTSPFYSATAKQGY- 342
           +    +  LK++++RQAIAH++D   ++  +  G + P+ + I P  + F++     G+ 
Sbjct: 285 VINLENDYLKELKVRQAIAHAIDVPALIDTVLYGYAVPSPTPISPGLAKFHNPDI--GFA 342

Query: 343 RYDPQEAQRLLKEAGY----HGQPIKM-IVNKRYSQMFDMGLLSQAMAVASGLNIQMETL 397
           ++D   A++LL EAG+     G+  K+ +    ++       ++QA++   G+   ++  
Sbjct: 343 KFDVALAEKLLDEAGFPRKDGGKRFKLRVTTNPFNPQTYSDFIAQALS-KIGIEADIQKF 401

Query: 398 EWGTQLE-RYQSGNYQMMAFSYSSRLDPATSFDSLMGDKTKE------PRKVWDNPQAQA 450
           ++GT ++  Y    + +   S S+  DP      +   K  +          + NP+   
Sbjct: 402 DFGTYVKVVYTDRAWDLSVESLSNTFDPTAGVQRVYWSKNFKIGLPFSNASHYANPEVDR 461

Query: 451 VLRDAVRESDTAKRQALFDQLHTMMIHDTPMV 482
           +L  A  E D  KR A F +   ++  D P++
Sbjct: 462 LLEAAAVEPDIEKRAAFFKEFQAVVAKDLPVI 493