Pairwise Alignments

Query, 349 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 340 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

 Score =  118 bits (295), Expect = 3e-31
 Identities = 91/318 (28%), Positives = 147/318 (46%), Gaps = 10/318 (3%)

Query: 6   RPTIATVAAHAGLSVATVDRVLNARAPVNPETAEQVFQAAEAVGYFAARLIGQRIRERRP 65
           +PT+  +A  AG+S+AT+DRVLN R  V+  T  +V  A   +GY   R I      +  
Sbjct: 2   KPTVHDIAERAGVSLATIDRVLNMRPGVHAATRARVEAAIAELGY--VRDIAAANLAKGR 59

Query: 66  TYRFGILLLATAQAFYASLAHAISAAAEQHAGANLTCQFDYIVDRTPAAIVAQIEQLAV- 124
            Y    +L     +F A+L   + AAA +   ++L      +++  P    A  E L V 
Sbjct: 60  NYSMIFILPGNDNSFMATLRAEVRAAAGR---SHLERTAIRVIEVPPFNAAALTEALEVA 116

Query: 125 ---QCDGLAVVSFAHPLINACLKQIREAGVPVVALLSDIHEQAEEPYVGQDNHVVGRTMG 181
              +  G+A V+     +     ++ E G+  V L+SD+     + Y G DN   GRT  
Sbjct: 117 RREKPSGVAFVATDSEDVAEAADRLAEDGIATVTLVSDLSGSRRDHYAGVDNVAAGRTAA 176

Query: 182 WLLARTCGARKGSVGILLGGHRFLGHQARVEGLHSYLAEHAPGLKPLEPLINLDNCDITE 241
            L+ R      G V ++ G      H+ R+EG  + L    P ++ L  L   D+  +T 
Sbjct: 177 SLMGRFLSGHGGDVAVVAGSMLVRDHRERLEGFRAVLETEFPQVRLLPVLEGRDD-PLTV 235

Query: 242 EATLDLLSRHSDLRGLCVVGGGGDGIISALAQLPKRPALCCILQESTELSRHALRQGLID 301
           EA +     +  L G+  +G G  G+I AL       AL  I  E TE + +ALR+GL+D
Sbjct: 236 EALVREAIGNDSLAGIYSLGAGNRGLIRALGAADGERALSVIAHELTENTANALREGLLD 295

Query: 302 VVMDSQPGQTAIALVQLM 319
            V++   G    + ++++
Sbjct: 296 AVLNQDAGHEVRSAIRVL 313