Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  154 bits (389), Expect = 1e-42
 Identities = 88/229 (38%), Positives = 130/229 (56%), Gaps = 12/229 (5%)

Query: 5   FQLALDSAPFLLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRG 64
           +Q  L  +   L G + T ++++  M  G +LG   AL+RLS+  L+    R YV   RG
Sbjct: 9   WQYLLQPSGVYLTGLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRFYVWLMRG 68

Query: 65  TPLLVQLFLIYYGLPQVGI----ELD--------PIPAAMIGFSLNMAAYACEILRAAIG 112
           TPLLVQ+  +Y  L   GI    ++D         I AA+I   LN  AY  EI+RA IG
Sbjct: 69  TPLLVQIVFLYTALAAGGIFRFEDIDLFGLVVPGNIQAAIIALGLNEGAYMAEIIRAGIG 128

Query: 113 SIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELF 172
           ++++GQ+EA  S+GM  A+ +RR +LPQA R  +PPLGN F  ++K+T L + I V EL 
Sbjct: 129 AVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVIGVQELL 188

Query: 173 RQAQLVSARTFEIFTMYLSAALIYWILASILAHLQNRLEDRVNRHDLES 221
              Q+V++ TF +F +YL  A+ + +L ++    Q  LE R  + D  S
Sbjct: 189 LSTQMVTSATFRVFELYLVVAIYFLMLTTLWGFFQRWLEARFGQSDRPS 237