Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 226 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  162 bits (410), Expect = 5e-45
 Identities = 87/204 (42%), Positives = 125/204 (61%)

Query: 13  PFLLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRGTPLLVQLF 72
           PFLL G   T+ L++  +  GL L   LAL  +S  + +S  AR Y+  FRGTPLLVQ+ 
Sbjct: 14  PFLLGGVGITIGLTIATIAIGLALALPLALGSMSSHRFLSAPARFYIWVFRGTPLLVQIV 73

Query: 73  LIYYGLPQVGIELDPIPAAMIGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQT 132
           +IY GLPQ+G+  D + +A++  SLN AAY  E +R    +I +GQ EAA ++ ++R  T
Sbjct: 74  IIYTGLPQLGLRFDVLTSAVLALSLNEAAYLSETIRGGFSAIAKGQVEAAKALSLSRFAT 133

Query: 133 LRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSA 192
           LR   LPQ +R  +PPLGNS   L+K T+LA+ I + EL R+AQ++    FE+  +Y  A
Sbjct: 134 LRLVTLPQVLRVIIPPLGNSVNGLLKATSLASVISMEELMRRAQVLMQEKFEVLELYCVA 193

Query: 193 ALIYWILASILAHLQNRLEDRVNR 216
           A  Y +L ++   +Q RLE    R
Sbjct: 194 ACFYLVLTTLWDRVQVRLERHYGR 217