Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  137 bits (346), Expect = 1e-37
 Identities = 76/202 (37%), Positives = 122/202 (60%), Gaps = 5/202 (2%)

Query: 15  LLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRGTPLLVQLFLI 74
           LL GA  TV+L++  M   + LG  LALMRLS  K +S  ++V+V FFR  PL++ ++  
Sbjct: 15  LLHGAGLTVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVEFFRNLPLILVVYWA 74

Query: 75  YYGLPQV-GIELDPIPAAMIGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTL 133
           +Y +P +  IE       ++   LN++AY  E  RA I SI +GQ EAA ++GM+R Q +
Sbjct: 75  FYVMPVLMHIEFSAFTTGLVALCLNVSAYNAETFRAGINSIRKGQMEAAIAMGMSRWQAM 134

Query: 134 RRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSAA 193
           ++ ++PQA R  LP L ++++SL KDT+L + I V EL   A  + + +F +  M  + A
Sbjct: 135 KKVVIPQAWRRVLPVLASTWVSLFKDTSLVSVIAVGELAHVALQIRSSSFRVLEMLTAMA 194

Query: 194 LIYWIL----ASILAHLQNRLE 211
           +IYW++    A ++  +Q + E
Sbjct: 195 VIYWLMGYPQAKLVDWIQKKFE 216