Pairwise Alignments

Query, 407 a.a., transporter from Pseudomonas simiae WCS417

Subject, 391 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 5e-41
 Identities = 115/371 (30%), Positives = 178/371 (47%), Gaps = 9/371 (2%)

Query: 26  SLAMGVFGLLTAEYLPASLLTPMAVDLGVSEALAGQAVTVTAVVALFAGLLVPGLTRGID 85
           +LA+G FG+   E+ P  +L  +A DLGVS   AG  V+  A+  L    L+   T  I 
Sbjct: 9   ALAIGAFGIGVTEFAPMGMLPSIATDLGVSIPAAGLLVSAYAIGVLIGAPLMTLATVKIP 68

Query: 86  RRVVLLGFSLLMIASNLLVAFSSSLAVLLLMRILLGVALGGFWSMAAAVAMRLVPAALLP 145
           RR +L+G   +    NL+ A +S  A LL+ R++  +  G F+ + + VA  +VP     
Sbjct: 69  RRYLLIGLMAIFTLGNLMSALASDYASLLVARVVTSLNHGAFFGIGSIVAASVVPPEKRA 128

Query: 146 RALSIIFSGIAVGTVVAVPLGSYLGGMYGWRSAFVAAAAVGGVTLAFQLFTLPRLA-PTG 204
            A++ +F G+ + T+  VPL ++LG M GWR+AF   A +G V +    + LP +A P G
Sbjct: 129 GAVAAMFMGLTLATIGGVPLATWLGEMLGWRTAFWGIAGLGLVAMTTLWYALPNVASPKG 188

Query: 205 TARLRTVLDVLLRPGIAIGMFGCVLVHTGHFALFTYIRPFLESTTGVGTEGLALMLLGFG 264
              +  +  +  RP +A  +   V+  +  F +FTYI P L+      T  +  ML+ FG
Sbjct: 189 EGAMAEIRVLGRRPVLA-ALLLTVVGSSAMFTVFTYIAPILQHEAAASTPFVTAMLVLFG 247

Query: 265 AANFVGTLLAGWMLVRYPLGTLVLMPVLVGLAALALV---LLPASLPGQALLLALWGMAF 321
               +G +  G    R    TL+L   L GL A+ LV   +L   LP  AL + +WG A 
Sbjct: 248 VGLTLGNVWGGKAADRSIDRTLILS--LAGLIAVLLVFPLVLDWPLP-TALAILVWGAAS 304

Query: 322 GGVPVAWSNWVARAVPDQAESAGGMVVASVQSAIAAGAA-GGGVMFSLSGIGGVFLGAGV 380
             +       V  A  D    A  + + +     A GAA GG V+ +  G   + L    
Sbjct: 305 FALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISLAGAA 364

Query: 381 LMVLAALLIAL 391
           +  L  +L+ L
Sbjct: 365 MAALGLVLVLL 375