Pairwise Alignments

Query, 407 a.a., transporter from Pseudomonas simiae WCS417

Subject, 408 a.a., Probable sugar efflux transporter from Pseudomonas putida KT2440

 Score =  169 bits (428), Expect = 1e-46
 Identities = 115/371 (30%), Positives = 185/371 (49%), Gaps = 4/371 (1%)

Query: 20  AWMAVFSLAMGVFGLLTAEYLPASLLTPMAVDLGVSEALAGQAVTVTAVVALFAGLLVPG 79
           +W++V +LA+  F   T E++P +LL+ +     +S A  G  +T+ A +   A L +  
Sbjct: 26  SWLSVIALALAAFIFNTTEFVPVALLSDIGRSFDMSTAQVGLMLTIYAWIVALASLPMML 85

Query: 80  LTRGIDRRVVLLGFSLLMIASNLLVAFSSSLAVLLLMRILLGVALGGFWSMAAAVAMRLV 139
           LTR I+RR +LL   L+ I S+LL   S S A+LL+ RI + +A   FWS+ A++A+R+ 
Sbjct: 86  LTRNIERRRLLLFVFLVFIVSHLLSWLSQSFAMLLVSRIGIALAHAVFWSITASLAVRVA 145

Query: 140 PAALLPRALSIIFSGIAVGTVVAVPLGSYLGGMYGWRSAFVAAAAVGGVTLAFQLFTLPR 199
           P     +AL ++ +G  +  V+ +PLG  +G   GWR  F++ A V   T+   + +LP 
Sbjct: 146 PPGQQAKALGLLATGTTLAMVLGIPLGRVVGEALGWRITFLSIAGVALATMLCLIKSLPL 205

Query: 200 LAPTGTARLRTVLDVLLRPGIAIGMFGCVLVHTGHFALFTYIRPFLESTTGVGTEGLALM 259
           L    +  LR++  +  RP + I      LV T  F  ++YI PF      +G +   L+
Sbjct: 206 LPSQNSGSLRSLPVLFKRPALVITYLLVTLVITAQFTAYSYIEPFALHVAQIGGDRTTLL 265

Query: 260 LLGFGAANFVGTLLAGWMLVRYPLGTLVLMPVLVGLAALALVLLPAS--LPGQALLLALW 317
           LL FG A   G+LL      R+P G LV    +  LAA  L++LP S      A+L   W
Sbjct: 266 LLLFGGAGVFGSLLFSRYSERFPHGFLV--GSIGVLAACLLLMLPLSGNFYVFAVLSMFW 323

Query: 318 GMAFGGVPVAWSNWVARAVPDQAESAGGMVVASVQSAIAAGAAGGGVMFSLSGIGGVFLG 377
           G+A     +A  +   +   D  + A  +        I  GA  G ++ S   +  + L 
Sbjct: 324 GVAILSFSLALQSKTLKLASDATDVAMALFSGIYNIGIGGGALLGSIVSSQMDVADIGLV 383

Query: 378 AGVLMVLAALL 388
            G + V+  +L
Sbjct: 384 GGSVAVVGLVL 394