Pairwise Alignments

Query, 500 a.a., L-arabinose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 492 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  356 bits (913), Expect = e-102
 Identities = 207/494 (41%), Positives = 299/494 (60%), Gaps = 5/494 (1%)

Query: 1   MTAAALRFDGIGKTFPGVKALDGISFSAHPGQVHALMGENGAGKSTLLKILGGAYIPNSG 60
           M    L   GI K +  ++ L  +    +PG+V AL+GENGAGKSTL  I+ G+  P+ G
Sbjct: 1   MREPVLSLRGISKRYGPLEVLKSVDLEVYPGEVVALLGENGAGKSTLSGIIAGSREPSEG 60

Query: 61  TLHIGEQVMAFKSAADSIASGVAVIHQELHLVPEMSVAENLFLGHLPSRFGVVNRGLLRK 120
            +    Q     S  ++I  G+ +IHQEL L+PE+S+AEN+F+G  P + G+V+R  + +
Sbjct: 61  KMTWLGQPYQPASPREAIDKGIVLIHQELKLLPELSIAENVFIGRWPMKNGIVDRAEMVR 120

Query: 121 QALACLKGLADEIDPAEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRL 180
           +A   L  L   I    K+  LS   +QL+EIAKAL+  A ++  DEPT++L   E   L
Sbjct: 121 RAQQQLARLNLHIPATRKVAGLSTANQQLIEIAKALALDAKLLILDEPTAALGGAETQAL 180

Query: 181 MAIIARLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFEDMSALTHDQLVTCMVG 240
              + +LR EG  ++Y+SHRMEE+ +I + + V +DG  V  F D SA     +V  MVG
Sbjct: 181 FEQVRKLRAEGVGIIYISHRMEEIRQITDRIVVLRDGERVHEFAD-SATPVRTIVESMVG 239

Query: 241 RDIQDIYDYRPREHGEVALKVDGLLG-PGLREPVSFNVRKGEILGLFGLVGAGRTELFRL 299
           R ++ ++   P    +V L+V GL G       +SF VR GEILG+ GL+GAGRTEL R 
Sbjct: 240 RSLERLFPALPEPQEKVVLEVKGLTGATNAFRDISFGVRAGEILGIAGLIGAGRTELVRA 299

Query: 300 LSGLERASAGQLELCGEPLHLQSPRDAIAAGVLLCPEDRKKEGIIPLSSVAENINISARG 359
           +SG +  SAG++ L GE L L+SP DAIA G+++ PEDRK +G++    + EN+ I A  
Sbjct: 300 ISGADPTSAGEVRLDGEVLSLKSPADAIAKGIVMVPEDRKLQGLVVEHEIGENL-IYANL 358

Query: 360 AHSTFGWLLREGWEKGNADQQINAMKVKTPNAAQKIMYLSGGNQQKSILGRWLSMPMKVL 419
                GW +    ++      I    VK   + Q    LSGGNQQK ++ +WL+   +V+
Sbjct: 359 DRVGTGW-ITPAIKRAFTRDAIAKFGVK-GRSEQPASDLSGGNQQKVVIAKWLARNPRVV 416

Query: 420 LLDEPTRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSDLMEVMGIADRILVLCEGALRGEQ 479
           +LDEPTRGID+GA+A IY II  LA  G+AVIVVSSDL EV+G+++RILVL +G   G  
Sbjct: 417 VLDEPTRGIDVGARAGIYDIIVGLAKDGVAVIVVSSDLEEVLGVSNRILVLAQGKQAGIL 476

Query: 480 TREHATESNLLQLA 493
            R+ A + ++++LA
Sbjct: 477 NRDEANDVSVMELA 490