Pairwise Alignments

Query, 440 a.a., L-arabinose transporter (from data) from Pseudomonas simiae WCS417

Subject, 446 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

 Score =  329 bits (844), Expect = 9e-95
 Identities = 169/410 (41%), Positives = 243/410 (59%), Gaps = 2/410 (0%)

Query: 7   LIRRITLKLIPFLILLYLIAYVDRSAVGFAKLHMGADVGIGDAAYGLGAGLFFIGYFLFE 66
           L R+IT +L+P L   Y++ Y+DR+ VG+A+L M   +G  DA +GLGAG+FFIGY +FE
Sbjct: 25  LFRKITWRLMPLLCACYVLNYLDRTNVGYAQLQMKEQLGFSDAVFGLGAGIFFIGYAVFE 84

Query: 67  IPSNLMLDRFGARRWFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFPGVLYY 126
           IPSNLML + G R    RIM  WG  +  M F   P  FYV+RFL+G  EAGF PGVL+Y
Sbjct: 85  IPSNLMLAKIGVRATLLRIMGLWGLASAAMMFATTPTQFYVLRFLIGVFEAGFAPGVLFY 144

Query: 127 ITQWFPVRHRGKILGLFILSQPIAMMITGPVSG-GLLGMDGMLGLHGWQWLFIVIGTPAI 185
           +T WFP   R +   LF ++   A ++ GP++G  +  +DG+L L GWQWLF++ G P++
Sbjct: 145 LTLWFPSHRRAQATALFFMAFGAAPIVAGPIAGLTMTCLDGVLSLRGWQWLFLLEGVPSV 204

Query: 186 LLTWPVLRYLPDGPKQVTWMSEDEKAWLTGELAKDLQAYGQTRHGNPLHALKDKRVLLLA 245
           LL     R+L + P Q  W+S  EK  +   LA+D  A+G         A++D RV L+ 
Sbjct: 205 LLGLAAFRWLSNSPAQAPWLSAAEKQRVARLLAEDQAAHGAAERHTFGAAMRDGRVWLIG 264

Query: 246 LFYLPVTLSIYGLGLWLPTLIKQFGGSDLTTGFISAVPYIFGIIGLLIIPRSSDRLNDRY 305
                + L IY L  W PT++K  G S L  GF + +P + GI   +++ R SDR  +R 
Sbjct: 265 FMSFLIILGIYALSFWQPTILKSMGLSVLQIGFYAVIPAVAGIAANIVVGRRSDRRKERR 324

Query: 306 GHLAVLYVLGAIGLFFSA-WLTVPLLQMAALCLAAFAMFSCTAVFWTLPGRFFAGASAAA 364
            H A+  V+GA GL  +  ++   L  +  L LA+  + +   V W +PG F + ++AAA
Sbjct: 325 WHFALSAVVGAAGLALTTLFMHDALAAVLCLALASMGISAAFTVLWAVPGTFMSRSAAAA 384

Query: 365 GIALINSVGNLGGYIGPFVIGALKEYTGNLASGLYFLSGVMVFGLVLTFV 414
           GIALI+++G   G + P ++GALK  TG   + LY LSG +V   +L  V
Sbjct: 385 GIALISTIGGSAGLVAPMMVGALKTLTGGFTTSLYVLSGALVLSALLMLV 434