Pairwise Alignments

Query, 440 a.a., L-arabinose transporter (from data) from Pseudomonas simiae WCS417

Subject, 455 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

 Score =  334 bits (857), Expect = 3e-96
 Identities = 169/436 (38%), Positives = 261/436 (59%), Gaps = 11/436 (2%)

Query: 8   IRRITLKLIPFLILLYLIAYVDRSAVGFAKLHMGADVGIGDAAYGLGAGLFFIGYFLFEI 67
           + ++   ++P  ++++++ Y+DR  +GF + H+ +D+GI  AAYG GAGLFFIGY LFE+
Sbjct: 25  VAKVKRHVLPLFVIMFIVNYLDRVNIGFVRPHLESDLGISAAAYGFGAGLFFIGYALFEV 84

Query: 68  PSNLMLDRFGARRWFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFPGVLYYI 127
           PSN++L + GAR W  RIM TWG +   MAFVQ    FYV+RFLLG AEAGFFPGV+YY 
Sbjct: 85  PSNMLLQKVGARLWLTRIMFTWGLVATAMAFVQNETQFYVLRFLLGVAEAGFFPGVIYYF 144

Query: 128 TQWFPVRHRGKILGLFILSQPIAMMITGPVSGGLLGMDGMLGLHGWQWLFIVIGTPAILL 187
           T+W P   RGK + +F+    +A +I+GP++G L+ + G LGLHGWQW+  + G  ++ L
Sbjct: 145 TRWLPAAERGKAIAIFLSGSALASLISGPLAGALMQIQG-LGLHGWQWMLFIEGMASVAL 203

Query: 188 TWPVLRYLPDGPKQVTWMSEDEKAWLTGELAKDLQ---AYGQTRHGNPLHALKDKRVLLL 244
            + V  +L   P+   W+S+ E+  L   + ++ Q   A G  R  +  + LKD++++L 
Sbjct: 204 CFFVFFWLDSKPQDAKWLSKAEQDALVATIDREQQAREAIGAVR-PSAWNLLKDRQIVLF 262

Query: 245 ALFYLPVTLSIYGLGLWLPTLIKQFGG-SDLTTGFISAVPYIFGIIGLLIIPRSSDRLND 303
            L Y  + L+IY    WLP++IK+ G  SD+  GF +++P++  I+ +      S R   
Sbjct: 263 CLIYFCIQLTIYAATFWLPSIIKRMGDLSDMQVGFFNSIPWLISILAMYAFAAGSARWKF 322

Query: 304 RYGHLAVLYVLGAIGLFFSAWLTVPLLQMAALCLAAFAMFSCTAVFWTLPGRFFAGASAA 363
           +   +A   ++ A G+F S     P+    A+C AA    S +++FW +P  +     AA
Sbjct: 323 QQAWVAGALLVAATGMFMST-TGGPVFAFVAVCFAAIGFKSASSLFWPIPQGYLDARIAA 381

Query: 364 AGIALINSVGNLGGYIGPFVIGALKEYTGNLASGLYFLSGVMVFGLVLTFVVYRLLERKH 423
           A IALINSVGNLGG++ P   G L++ TG++  GLY   G+ V  ++    ++ +  R  
Sbjct: 382 AVIALINSVGNLGGFVAPTTFGLLEQQTGSIQGGLY---GLAVTSVLAAIAIFFVRTRPK 438

Query: 424 VLPADQF-AASARGAT 438
             P+D   A SA G T
Sbjct: 439 GAPSDDLKAPSALGQT 454