Pairwise Alignments

Query, 440 a.a., L-arabinose transporter (from data) from Pseudomonas simiae WCS417

Subject, 437 a.a., Putative metabolite transport protein NicT from Pseudomonas putida KT2440

 Score =  329 bits (843), Expect = 1e-94
 Identities = 172/412 (41%), Positives = 249/412 (60%), Gaps = 4/412 (0%)

Query: 7   LIRRITLKLIPFLILLYLIAYVDRSAVGFAKLHMGADVGIGDAAYGLGAGLFFIGYFLFE 66
           L  +IT +LIPFL   YL AY+DR  VGFAKL M  D+    AAYGLGAGLFF+GY +FE
Sbjct: 20  LYSKITWRLIPFLCFCYLAAYLDRINVGFAKLQMLEDLQFSTAAYGLGAGLFFVGYIIFE 79

Query: 67  IPSNLMLDRFGARRWFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFPGVLYY 126
           +PSNL+L R GA+ W ARIMITWG ++    FV     FY++RFLLGAAEAGF PGVLYY
Sbjct: 80  VPSNLILQRVGAKLWIARIMITWGLLSACTMFVTSTTQFYILRFLLGAAEAGFLPGVLYY 139

Query: 127 ITQWFPVRHRGKILGLFILSQPIAMMITGPVSGGLLG-MDGMLGLHGWQWLFIVIGTPAI 185
           +T W+P   RG+I+ LF++  P++ +I GP+SG ++G  D + GLHGWQWLF++   P++
Sbjct: 140 LTMWYPTYRRGRIIALFMIGLPLSSVIGGPISGWIMGHFDQVQGLHGWQWLFLLEAIPSV 199

Query: 186 LLTWPVLRYLPDGPKQVTWMSEDEKAWLTGELAKDLQAYGQTRHGNPLHALKDKRVLLLA 245
           LL       LP+  +Q  W+S D+KA L  +LA D  A G+    +      + +V +L 
Sbjct: 200 LLGILTFWALPNHFQQAKWLSADDKAQLAADLAAD-DAEGKDSKHSFRDGFFNLKVWMLG 258

Query: 246 LFYLPVTLSIYGLGLWLPTLIKQFGGSD-LTTGFISAVPYIFGIIGLLIIPRSSDRLNDR 304
                + LS Y +G W+PT I+  G SD    G ++A+P +  + G+L+I  SSDR  +R
Sbjct: 259 GIDFSILLSAYAMGFWMPTFIRDAGVSDTFHIGLLTAIPSLAALAGMLMIGASSDRHRER 318

Query: 305 YGHLAVLYVLGAIGLFFSAWLTVPLLQMAAL-CLAAFAMFSCTAVFWTLPGRFFAGASAA 363
             H+ V +++GAI +  S   +  L+    L  +A+ A+     VF++LP  F  G +AA
Sbjct: 319 RWHIIVPFIIGAIAMASSTLFSQNLVMTVVLFAIASAAIIGAVPVFFSLPATFLKGTAAA 378

Query: 364 AGIALINSVGNLGGYIGPFVIGALKEYTGNLASGLYFLSGVMVFGLVLTFVV 415
            G AL  SV N+ G +   ++G + + TG   + L+  +G ++    L   +
Sbjct: 379 TGFALACSVANIAGLVSNSLMGVVTDLTGTSHAALWVFAGCLILSCFLVIAL 430