Pairwise Alignments

Query, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  248 bits (632), Expect = 8e-70
 Identities = 183/585 (31%), Positives = 288/585 (49%), Gaps = 20/585 (3%)

Query: 74  VAAKDLKSYAGA------DAAQ-IPLTPTNKELLEIFDQFAKSHPSTAYLSLGLKDGGYA 126
           V A +++++ G       +AAQ I + P    +  + +Q   +    A   +G   G + 
Sbjct: 52  VTASNIQTWLGGRIALVENAAQNIAINPEPSAVASLLEQKTLTSSFMATY-VGDSKGAFT 110

Query: 127 SWPDDTKLNNYDPRVRPWYQAAIAAPGKTVRTGAYYWAPDDVTLIGTVHTVADATGNILG 186
             PD    + +DPRVRPWY+ A ++ G T+ T  Y  A     +I         T +I G
Sbjct: 111 IRPDTKMPDGFDPRVRPWYKGAQSSNGSTL-TEPYIDAATGKLIISVATPSTQGTQSI-G 168

Query: 187 VVGLDVSLKQLTELVRNIKLGDSGYLMLVEGNGNVLVDPSDAKHNFKPLADLGPNYAELA 246
           VVG D+SL+ L + +  +  G  GY  LV  +G VLV P D     K LAD+ P      
Sbjct: 169 VVGGDLSLQTLVDNIGALNFGGMGYAFLVSADGKVLVHP-DKNLVMKTLADVYPK--NTP 225

Query: 247 KRGDGVTQIEIDGVAYMANMVSSKDL---GWRFIGLIKRDE--VMAGATRLTWLIAAIAA 301
           K     +++E +G   +   +  K L    W     + +D+   M    R + +IA   A
Sbjct: 226 KISADFSEVEANGKDNIVTFIPIKGLPSVNWDLGISVDKDKSFAMLSEFRTSAVIATFIA 285

Query: 302 VLALVFAIVGASFASVIVRPIRGVADGLQEIAEGEGDLTRQLKVQGKDETASLAGWFNQF 361
           V+ ++ A++G     ++++P+  +   +Q+IA+GEGDLTR+L +Q  DE   L   FN+F
Sbjct: 286 VV-IIIALLGM-LIRILMQPLHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNRF 343

Query: 362 LSMIAQLVQRIGNASSDLQSAAADTREVAHNMNQAAGRQREAVELVSTAFNEMVATANEV 421
           +  I   ++ + +A+  +   A      +++    +  Q      V+ A N++ A A E+
Sbjct: 344 VERIHTSIREVSSATEHVNEVALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQEI 403

Query: 422 ARSCSAAATSADEGYRDVHDGQQHIGEATGSVLKLSEDLQRSTQTMQQLEQDSKNINTIL 481
           AR+ + A+  A +      DGQQ +     ++ +LS  +  S+  ++ L   + NI  IL
Sbjct: 404 ARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQIL 463

Query: 482 DTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLGNLA 541
           + I SI++QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT +S  ++  ++  L 
Sbjct: 464 EVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQ 523

Query: 542 RRTQEVTQQMQGSLLVSHTSVERIQQARDSFDKIRGSVDSIRDQNTQIATAAEEQHQVAE 601
              +E    M  S   S  SV+    A +  + +   +  I   N  +ATA EEQ  V E
Sbjct: 524 VGARESVSTMGESQRHSLESVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVE 583

Query: 602 EINRHIAQIHADAQLVEGFAHSAQTGSGRLTDISGQLKGLVGRFK 646
            IN  I +I+   Q       S       L   + +LK LVG F+
Sbjct: 584 SINMDITEINTLNQEGVENLQSTLRACADLEQQAARLKQLVGSFR 628