Pairwise Alignments

Query, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  234 bits (596), Expect = 1e-65
 Identities = 138/364 (37%), Positives = 207/364 (56%), Gaps = 3/364 (0%)

Query: 284 EVMAGATRLTWLIAAIAAVLALVFAIVGA-SFASVIVRPIRGVADGLQEIAEGEGDLTRQ 342
           EV   A      +  +A VLAL   ++ A +    I+ P+R      + +A G  DLT+ 
Sbjct: 276 EVRDAAAAQAKTLLTVATVLALALGLLAAWAITRQIIIPLRQTLRAAERVASG--DLTQS 333

Query: 343 LKVQGKDETASLAGWFNQFLSMIAQLVQRIGNASSDLQSAAADTREVAHNMNQAAGRQRE 402
           L+VQ +DE   L    ++    + +L+  IG+  + + SAA +   V    +     Q+ 
Sbjct: 334 LQVQRRDELGQLQASMHRMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQKV 393

Query: 403 AVELVSTAFNEMVATANEVARSCSAAATSADEGYRDVHDGQQHIGEATGSVLKLSEDLQR 462
             + V+TA N+M AT +EVAR+   A+ +A    +   +G + +GEA   + +L+ ++  
Sbjct: 394 ETDQVATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEVVN 453

Query: 463 STQTMQQLEQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRAL 522
           S++ M  L+ +S  I ++LD I+S+A+QTNLLALNAAIEAARAG+ GRGFAVVADEVR+L
Sbjct: 454 SSEAMNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSL 513

Query: 523 ARRTADSTGEIDSLLGNLARRTQEVTQQMQGSLLVSHTSVERIQQARDSFDKIRGSVDSI 582
           A+RT  ST EI+ L+  L   TQ V   M  S  ++ +SVE  ++A  S + I  +V SI
Sbjct: 514 AQRTQQSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSI 573

Query: 583 RDQNTQIATAAEEQHQVAEEINRHIAQIHADAQLVEGFAHSAQTGSGRLTDISGQLKGLV 642
           +  N QIATAAEEQ  VAEEINR +  +   +      +    + S  L  +   L+GLV
Sbjct: 574 QAMNQQIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQGLV 633

Query: 643 GRFK 646
           GRF+
Sbjct: 634 GRFR 637



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 46/209 (22%), Positives = 83/209 (39%), Gaps = 19/209 (9%)

Query: 365 IAQLVQRIGNASSDLQSAAADTREVAHNMNQAAGRQREAVELVSTAFNEMVATANEVARS 424
           +A+L + + N    +Q       + A +  Q   +QREAV +   AFNE+         S
Sbjct: 79  LAELEKALSNLDRQVQLMLGQIEQPADH--QRLEQQREAVRIYQQAFNELKQADQRREAS 136

Query: 425 CSAAATSADEGYRDVHDGQQHIGEATGSVLKLS--EDLQRSTQTMQQLEQDSKNINTILD 482
                +SAD+           IG    S+L+ +     Q +      L+Q    +     
Sbjct: 137 RDVLGSSADKAV-------DLIGRVQRSLLQGANINQYQHAVDVSALLQQARFQVRGYTY 189

Query: 483 TIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSL--LGNL 540
           +  +  +QT L A++ A+   RA        V A+   +L        G  D++   GN 
Sbjct: 190 SGNADYQQTALKAIDQALAELRA----LPAKVPAEHAASLDDAATAMGGYRDAVTQFGNA 245

Query: 541 ARRTQEVTQQM--QGSLLVSHTSVERIQQ 567
              +++  Q+M  QG++L+  + +    Q
Sbjct: 246 QLASEQALQRMVEQGTVLLQASQMMTASQ 274