Pairwise Alignments

Query, 421 a.a., porin from Pseudomonas simiae WCS417

Subject, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  717 bits (1852), Expect = 0.0
 Identities = 339/410 (82%), Positives = 375/410 (91%), Gaps = 4/410 (0%)

Query: 16  LALGAALPVQADD----TTLTGDWGGLRHELDAQGIRFTGEYSGETAYNAHGGQHRSARY 71
           LAL +   + +DD    +TLTGDWGGLRH+L+  G++ TG+YSGETAYNAHGG HRSARY
Sbjct: 13  LALASTTALASDDLMTRSTLTGDWGGLRHQLEEDGVKITGDYSGETAYNAHGGLHRSARY 72

Query: 72  SQNLKLGVQFDLGKLYGFNNGDRIQVTLNDRRGNSASEDLVGNRLPIQENYGGLYTRLTE 131
           SQN+KLGVQFDL KLYG +NG ++Q+T+NDRRGNSASEDLVGNRLPIQENYGGLYTRLTE
Sbjct: 73  SQNVKLGVQFDLSKLYGLDNGGKVQLTINDRRGNSASEDLVGNRLPIQENYGGLYTRLTE 132

Query: 132 LSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNA 191
           LSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNA
Sbjct: 133 LSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNA 192

Query: 192 HLGARVKYDFAPNWQLRVAAFNVDPQSNGNSSRAWHLGPKHTTGTVVPIELVYKHAGSLP 251
           HLG RVKYD +P WQLRVAAFNVDP+SNGNSSRAWHLGPKHTTGTVVP+ELVYK  G LP
Sbjct: 193 HLGVRVKYDLSPAWQLRVAAFNVDPESNGNSSRAWHLGPKHTTGTVVPVELVYKLQGELP 252

Query: 252 GEYKLGYYYDSSDVKRIGSNKEVSGRGGHYLLIDQAVWASESSAGRVLHAFGQYSAASEA 311
           GEYKLGYYYDSSDVKRIGS+ EVSGRGGHYLL+DQAVW  ++S GR LHAFGQYSA+S+A
Sbjct: 253 GEYKLGYYYDSSDVKRIGSDDEVSGRGGHYLLVDQAVWNDQASPGRSLHAFGQYSASSKA 312

Query: 312 ASPFSKWYGAGVVLYKPFEGRPRDTLALGYGRAVPNPRSREVQELAALNAGNDYPNLNNA 371
           ASPF+KWYGAGVVLYKPFEGRP+DT+ALGYGRAVPNPRSR+V E AA NAG  +P++++A
Sbjct: 313 ASPFTKWYGAGVVLYKPFEGRPKDTVALGYGRAVPNPRSRDVLEDAAFNAGQQFPDIDSA 372

Query: 372 EQLIELSYGYQATPWLTLRPDVQYIIEPGAFSGENIDNALVLGLQAKAVF 421
           EQLIELSYGYQATPWL LRPDVQYIIEPGAFSG++IDNALV+GLQ KA F
Sbjct: 373 EQLIELSYGYQATPWLNLRPDVQYIIEPGAFSGKDIDNALVVGLQVKATF 422