Pairwise Alignments

Query, 391 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 20/221 (9%)

Query: 67  DDPLIGEALAGSKLPVVAVGGSYEDVRAYPKGMPYVATDNYALIKLAYEHLIEAGLTRFA 126
           DD  + + L G ++P V V     D          V T +     LA  HL+  G  R A
Sbjct: 128 DDDALVKQLHGLRVPTVLVDREIAD-----PACDLVETAHMQGGLLAVRHLLSLGHKRIA 182

Query: 127 CFSLPEAQANRW-AQEREKAFRRLLQRDGLQVEVYRGLGTSAPLW------DSAVEQQIA 179
           C      QA    +++R + +R  L   G   ++  G    A LW          E   A
Sbjct: 183 CIG---GQAGVMPSEQRIEGWRMALAEAGATPDIANG---DALLWRGGFTSQGGYEAMHA 236

Query: 180 WLHSLPKPIGIIAVTDARARQLLQACLTAGIAVPEEVALIGIDNDPLTRTLTRVPLSSVI 239
            L +  KP  +    D  A   L+A   +G+ VP++++++G D+  L+   T  PL++V 
Sbjct: 237 ILRTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELS-AYTSPPLTTVA 295

Query: 240 QGTETMGRTAAALLHQMLHGKPCRGEQILVPPDAINVQASS 280
           Q  E +G  A  +L + + GK     ++++ P+ + V+AS+
Sbjct: 296 QPKERIGAMAVDMLLEQMGGKRRDARKVVLQPE-LRVRAST 335