Pairwise Alignments

Query, 391 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 407 a.a., DNA-binding transcriptional regulator from Dickeya dianthicola ME23

 Score =  354 bits (908), Expect = e-102
 Identities = 185/384 (48%), Positives = 256/384 (66%), Gaps = 6/384 (1%)

Query: 8   HRIALLFNGSKIYDRGIIAGIGNYLSSTRASWDLFLEEDFLCRLKGIERWQGDGIIADFD 67
           +RI LLFN +K+YDR ++ G+G YL +++  WD+F+EEDF CR+  I  W GDG+IADFD
Sbjct: 6   YRITLLFNANKVYDRQVVEGVGEYLQASQCDWDIFIEEDFRCRIDNIRDWLGDGVIADFD 65

Query: 68  DPLIGEALAGSKLPVVAVGGSYEDVRAYPKGMPYVATDNYALIKLAYEHLIEAGLTRFAC 127
           DP I   LAG ++P+V VGGSY   + YP  + Y+ATDNYAL++ A+ HL   GL RFA 
Sbjct: 66  DPAIIALLAGVRVPLVGVGGSYHSPQDYPP-VHYIATDNYALVESAFLHLKNKGLNRFAF 124

Query: 128 FSLPEAQANRWAQEREKAFRRLLQRDGLQVEVYRGLGTSAPLWDSAVEQQIAWLHSLPKP 187
           + LP +    WAQERE AFR+L+  +  Q  VY+G+ TS   W  A  +   W+ +LP  
Sbjct: 125 YGLPASVGKGWAQEREHAFRQLVAAEQYQGVVYQGMETSPGNWQYAQNRLADWIQTLPPQ 184

Query: 188 IGIIAVTDARARQLLQACLTAGIAVPEEVALIGIDNDPLTRTLTRVPLSSVIQGTETMGR 247
            GIIAVTDARAR LLQ C    IAVPE++ +IGIDN+ LTR L+RV LSSV QGT  MG 
Sbjct: 185 TGIIAVTDARARHLLQVCEHLNIAVPEKLCVIGIDNEELTRYLSRVALSSVAQGTRQMGY 244

Query: 248 TAAALLHQML---HGKPCRGEQILVPPDAINVQASSLHQPLGNPYVMQALLFIRQYACQG 304
            AA LLHQ+L   +  P   ++ILVPP  +  ++S+ ++ + +P V+QA+ FIR +AC+G
Sbjct: 245 RAAKLLHQLLLTPYALPL--QRILVPPLRVVERSSTDYRSVHDPAVIQAMHFIRHHACKG 302

Query: 305 IKTAQVAGYVGVSRSSLETHFRKARGCSVHDEILRFKLAAAAKGLQNQALAIADIAQACG 364
           IK  QV   VG+SRS+LE  F+   G ++H  I   KL  A   L + +L+I +I+  CG
Sbjct: 303 IKVEQVLDAVGLSRSNLEKRFKDETGQTIHGMIHTEKLERARNLLVSTSLSINEISSMCG 362

Query: 365 FKSAQYLHTVFRREFGCTPREYQQ 388
           + S  Y ++VFR+++  TPREY++
Sbjct: 363 YPSLPYFYSVFRKDYDLTPREYRE 386