Pairwise Alignments

Query, 438 a.a., Xylose isomerase (EC 5.3.1.5) (from data) from Pseudomonas simiae WCS417

Subject, 436 a.a., xylose isomerase from Agrobacterium fabrum C58

 Score =  528 bits (1360), Expect = e-154
 Identities = 255/434 (58%), Positives = 314/434 (72%), Gaps = 2/434 (0%)

Query: 3   YFPGVEKVRFEGPSSDAPLAFRHYDANKLILGKPMREHLRMAACYWHTFVWPGADMFGVG 62
           +F  + K+++EGP S  PLAFRHY+ ++++ GK M +HLR A  YWHTF WPG D FG  
Sbjct: 5   FFGDIAKIKYEGPDSTNPLAFRHYNPDEIVGGKRMEDHLRFAVAYWHTFTWPGGDPFGGQ 64

Query: 63  TFKRPWQRSGDPMELAIGKADAAFEFFSKLGIDYYSFHDTDVAPEGSSLKEYRHHFAQMV 122
           TF+RPW    D M+ A  KAD AFEFFS LG  +Y FHD DV PEG +  E   +  ++V
Sbjct: 65  TFQRPWFE--DTMQAAKLKADVAFEFFSLLGSPFYCFHDADVRPEGKNFAENTKNLNEIV 122

Query: 123 DHLERHQEHTGIKLLWGTANCFSNPRFAAGAASNPDPEVFAYAAAQVFSAMNATLRLKGS 182
           D+  + Q  TG+KLLWGTAN FSN RF +GAA+NPDP+VFA++AA V + M+AT  L G+
Sbjct: 123 DYFAQKQADTGVKLLWGTANLFSNRRFMSGAATNPDPDVFAFSAATVKTCMDATKTLGGA 182

Query: 183 NYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKHQY 242
           NYVLWGGREGYETLLNTDL RE +QLGRF+ +VVE+K+KIGF+G +LIEPKPQEPTKHQY
Sbjct: 183 NYVLWGGREGYETLLNTDLSRELDQLGRFLNLVVEYKYKIGFEGTILIEPKPQEPTKHQY 242

Query: 243 DYDSATVFGFLHEYGLEHEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGDPQ 302
           DYD ATV+ FL + GLE E+KVNIE  HA LAGHSF HE+A A + GIFGSID NR D Q
Sbjct: 243 DYDVATVYAFLQKNGLEKEVKVNIEQGHAILAGHSFEHELAMANAFGIFGSIDMNRNDYQ 302

Query: 303 NGWDTDQFPNSVEEMTLATYEILKAGGFKNGGYNFDSKVRRQSLDDVDLFHGHVAAMDVL 362
           +GWDTDQFPN+V EM LA Y +L  GGFKNGG NFDSK+RRQSLD  DL  GH+  MD  
Sbjct: 303 SGWDTDQFPNNVPEMALAYYHVLAGGGFKNGGTNFDSKLRRQSLDPQDLLIGHIGGMDCC 362

Query: 363 ALALERAAAMVENDRLQQFKDQRYAGWQQPLGQAVLAGEFSLESLAEHAFAHELDPQAVS 422
           A  L+ AA M+E+  L +   +RYA W  P  Q +L GE  LE +A      +++P+   
Sbjct: 363 ARGLKAAAKMIEDGALSKPLSERYAKWDSPEAQKMLRGELKLEEIAALVERDDINPEPKP 422

Query: 423 GRQEMLEGVVNRFI 436
           GRQE LE VVNR++
Sbjct: 423 GRQEYLENVVNRYV 436