Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 90/332 (27%), Positives = 156/332 (46%), Gaps = 25/332 (7%)

Query: 7   TLIATA-LALLA--LPAMADSAHPKIGFSIDDLR---LERWSRDRDYFVAAAE-KLDAKV 59
           TL ATA L+LLA  +   AD    K+G ++  L+   ++ W R+     A  +  +   V
Sbjct: 6   TLAATAALSLLACSIAMAADGKTYKVGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTV 65

Query: 60  FVQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLILN 119
           F  + DA  Q   +QIEN++++  D I+ VP +       V  A    + V++ +  + +
Sbjct: 66  FDGNYDALTQN--NQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIASNTKVAD 123

Query: 120 ADIDAYISFDNEKVGEMQASGVLQAAP-KGNYFLLGGAPTDNNAKVLRE-GQMKVLQPAI 177
           A +  Y+  D+ + G +QA  ++     KGN  ++ G P   +A++ RE G+++VL    
Sbjct: 124 ASVP-YVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQG-PIGQSAQIDREKGELEVLGK-- 179

Query: 178 DKGDIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAIQALAAQKLA 237
              DIK++ ++    W+  +AL++ E+ L  +   I+ ++A ND  A GA+QAL +  L 
Sbjct: 180 -HPDIKIIEKK-TANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSHGLT 237

Query: 238 GK-VPISGQDADLAAIKRV-IDGTQTMTVYKPLKLIASEAAKLSVQLARNEKP------T 289
            K VP++  D    AI+    D   T       +   +    L     ++ KP       
Sbjct: 238 SKDVPVTSIDGMPDAIQAAKKDEVTTFLQDAQAQSQGALDVALRALAGKDYKPQSVIWER 297

Query: 290 YSSQYDNGSKKVDTILLTPTPLTKANIDLLEK 321
           Y+ +   G       +L   P+T AN D L K
Sbjct: 298 YAKEVKWGDGTAKNYILPWVPVTNANADALYK 329