Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 309 a.a., Inositol transport system sugar-binding protein (from data) from Pseudomonas simiae WCS417

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 22/289 (7%)

Query: 10  ATALALLALPAMADSAHPKIGFSI---DDLRLERWSRDRDYFVAAAEKLDA-KVFVQSAD 65
           A AL++L    +A +A  KIG S+   DD  L     D D    +  K D  ++  + A 
Sbjct: 9   ALALSMLLASGVASAADLKIGVSMSAFDDTFLTYLREDMDKQAKSYPKGDGVQLQFEDAR 68

Query: 66  ANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLILNADID-- 123
           A+  KQ+SQ+EN IS+ VD I++ P +     N +  A  A I +V  +R   +  +   
Sbjct: 69  ADVVKQLSQVENFISQKVDAIIVNPVDTASTANIIKAATAAKIPLVFVNRRPDSQTLAPG 128

Query: 124 -AYISFDNEKVGEMQASGVLQ-AAPKGNYFLLGGAPTDNNAKVLREGQMKVL--QPAIDK 179
            A ++ D+ + G++Q   + +    KGN  +L G   +N+     +G  +VL   P I  
Sbjct: 129 VAAVTSDDVEAGKLQMQYIAEKLGGKGNIVILLGDLANNSTTNRTKGVKEVLTKYPGIK- 187

Query: 180 GDIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAIQALAAQKLAGK 239
                + Q+    W     +++V + LT+  +   A++++ND  A GA  AL   K AGK
Sbjct: 188 -----IEQEQTGIWLRDRGMTLVNDWLTQGRD-FQAVLSNNDEMAIGAAMAL---KSAGK 238

Query: 240 --VPISGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNE 286
             V I+G D     +  +  G  T++ ++  K  A ++ + + ++A+NE
Sbjct: 239 KGVLIAGVDGTPDGLNAITKGDMTVSAFQDAKGQADKSVETARKMAKNE 287