Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 356 a.a., multiple monosaccharide ABC transporter substrate-binding protein from Variovorax sp. OAS795

 Score =  140 bits (352), Expect = 6e-38
 Identities = 106/354 (29%), Positives = 180/354 (50%), Gaps = 28/354 (7%)

Query: 5   KRTLIATALALLA--LPAMADSAHPK----IGFSIDDLRLERWSRDRDYFVAAAEKLDAK 58
           KR  +  ++A LA  +  +A  AH +    I  S+      RW  D    V   ++   K
Sbjct: 2   KRNFLKASIAGLAFAIVGIAPIAHAQDKGLIAISMPTKSSARWIADGANMVKYFKEKGYK 61

Query: 59  VFVQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLIL 118
             +Q AD +   Q++QIEN++++G  V+VI   + T L++ + +A   G+KV++YDRLI 
Sbjct: 62  TDLQYADDDIPNQLAQIENMVTKGSKVLVIAAIDGTTLSDVLQKAADKGVKVIAYDRLIK 121

Query: 119 NA-DIDAYISFDNEKVGEMQASGVLQA----APKG--NYFLLGGAPTDNNAKVLREGQMK 171
            + ++D Y +FDN +VG +QA  +  A    + KG  N  L GG+P DNNA     G M 
Sbjct: 122 GSKNVDYYATFDNFQVGVLQAQSIEAALGLKSGKGPFNIELFGGSPDDNNAFFFYNGAMS 181

Query: 172 VLQPAIDKGDIKVVGQQW------VKEWNPTEALSIVENALTR--NNNKIDAIVASNDAT 223
           VL P I  G + V  +Q          W+   A + ++N L+     +++DA+++  D  
Sbjct: 182 VLDPYIKSGKLVVRSKQMGMDKVGTLRWDGAVAQARMDNLLSAYYTKDRVDAVLSPYDGL 241

Query: 224 AGGAIQALAA---QKLAGKVPI-SGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLS 279
           + G + +L        +  +PI SGQDA++ ++K ++   QT TV+K  + +A     ++
Sbjct: 242 SIGILSSLKGVGYGSASQPMPIVSGQDAEIPSVKSILRKEQTSTVFKDTRELAKVTVAMA 301

Query: 280 VQLARNEKPTY--SSQYDNGSKKVDTILLTPTPLTKAN-IDLLEKDGFYTKEQI 330
             +   + P    +  Y+NG K V + LL P  +  AN   +L   G+Y + Q+
Sbjct: 302 DAMLSGKTPEVNDTKTYNNGIKVVPSYLLKPVSVDGANWKQVLVDSGYYKESQV 355