Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 37/296 (12%)

Query: 5   KRTLIATALALLALPAMADSA---------HPKIGFSIDDLRLERWSRDRDYFVAAAEKL 55
           K+ L+ATAL + A PA+A++          +P +   ++ +R E   RD++         
Sbjct: 2   KKLLMATALCIFATPALAETRIAVSMTSFDNPFLTILLNGIRAEA-GRDKNI-------- 52

Query: 56  DAKVFVQSADANEQKQISQIENLISRGVDVIVI--VPFNATVLTNAVAEAKKAGIKVVSY 113
             ++ V+ A  +  KQ++Q++N I+ GVD I++  V  +AT      A A K  +  V++
Sbjct: 53  --ELLVEDAQLDPSKQLNQVQNFIANGVDAIIVNAVDGDATAAITKAASAAKIPLVYVNH 110

Query: 114 DRLILNA---DIDAYISFDNEKVGEMQASGVLQ-AAPKGNYFLLGGAPTDNNAKVLREGQ 169
               L     D  A++  +    G M+A    +    KG   +L G P +N+A ++R   
Sbjct: 111 PPAELETGLPDGTAFVGSNELDSGTMEAEAACKLMGGKGKAVILMG-PLENHAALVR--- 166

Query: 170 MKVLQPAIDKGDIKV-VGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAI 228
            K ++    K + K+ + ++    W+ T+A  +V + LT    + DA++A+ND  A GA 
Sbjct: 167 TKDVETVFSKPECKIEILEKQTANWSRTQAQDLVSSWLTA-GIQFDAVIANNDEMAIGAA 225

Query: 229 QALAAQKLAGK-VPISGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLSVQLA 283
           QAL A  ++ K V I+G DA    +  +  G   +TVY+     A++  ++SVQ A
Sbjct: 226 QALKAAGVSMKDVVIAGIDATPDGLAAMQAGDLDITVYQN----ATKQGEVSVQTA 277