Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 338 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 38/284 (13%)

Query: 3   SFKRTLIATA-LALLALP--AMADSAHPKIGFSID-------DLRLERWSRDRDYFVAAA 52
           +F++ L+A+A +A  ALP  A AD++  KI  S +          L  W +     VA  
Sbjct: 2   AFRKMLLASAAVACAALPITAHADTSAKKIALSNNYAGNSWRQAMLTSWDKITKQAVADK 61

Query: 53  EKLDAKVFVQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVS 112
           +   A  F  +A+    +Q +QI+NLI +G D IVI   + T L  AV EA  AGI VVS
Sbjct: 62  QVAAADAFT-TAENQATEQAAQIQNLILQGYDAIVINAASPTALNGAVKEACDAGITVVS 120

Query: 113 YDRLILNADIDAYISFDNEKVGEMQASGVLQAAPKGNYFL----LGGAPTDNN------A 162
           +D  I+       I+ D + +GE Q   + +A PKG   L    L G   D+       A
Sbjct: 121 FDG-IVTEPCAWRIAVDFKAMGESQIDYLAKAMPKGGNLLEIRGLAGVSVDDEIHAGIAA 179

Query: 163 KVLREGQMKVLQPAIDKGDIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDA 222
            V +  Q K+         +  V   W ++        I+ +       ++ A+V     
Sbjct: 180 GVAKNPQFKI---------VGSVNGDWAQDVAQRAVAGILPSL-----PEVAAVVTQGGD 225

Query: 223 TAGGAIQALAAQKLAGKVPISGQDADLAAIKRVID--GTQTMTV 264
             G A    AA++    + +  ++ +L   K+  D  G +TM+V
Sbjct: 226 GYGAAQAFAAAKRPTPTIVMGNREDELQWWKQQKDASGYETMSV 269