Pairwise Alignments

Query, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  240 bits (613), Expect = 3e-68
 Identities = 140/333 (42%), Positives = 204/333 (61%), Gaps = 7/333 (2%)

Query: 1   MKSFKRTLIATALALLALPAMADSAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAKVF 60
           M SF + L  TA+ L++L   A +A   +G S  + + ERW  D     AA +K  AK  
Sbjct: 1   MNSFAKLLAGTAV-LVSLHTAAIAADLVVGVSWSNFQEERWKTDEAAIKAALDKAGAKYI 59

Query: 61  VQSADANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLILNA 120
              A ++  KQ++ +E+LIS+G + ++I+  ++  +  AV +A   GI VV YDRLI N 
Sbjct: 60  SADAQSSAAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIENK 119

Query: 121 DIDAYISFDNEKVGEMQASGVLQAAPKGNYFLLGGAPTDNNAKVLREGQMKVLQPAIDKG 180
           +   YI+FDN++VG +QA+ V +  P+GNY  + G+ +D NA  L  GQ +VL+ A+  G
Sbjct: 120 NA-FYITFDNKEVGRLQAAEVFKVKPEGNYVFIKGSSSDPNADFLFAGQQEVLKAAMSSG 178

Query: 181 DIKVVGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAIQALAAQKLAGKV 240
            IK VG+ +   W P  A   +E  LT+NNNK+DA+VASND TAGGAI ALAAQ +AG V
Sbjct: 179 KIKNVGEAYTDGWKPENAQKNMEQFLTKNNNKVDAVVASNDGTAGGAIAALAAQGMAGSV 238

Query: 241 PISGQDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNEKPTY---SSQYDNG 297
           P+SGQDAD AA+ RV  GTQT++V+K  + +  EAA +++ LA  +K T     + +D G
Sbjct: 239 PVSGQDADFAALNRVALGTQTVSVWKDSRELGKEAAGIALALAGGKKMTEIKGVTAFDGG 298

Query: 298 SKKV--DTILLTPTPLTKANIDLLEKDGFYTKE 328
            KKV   ++ L P  +TK N+  +   G+  KE
Sbjct: 299 PKKVTMQSVFLKPIAITKDNLGTVIDAGWIKKE 331