Pairwise Alignments

Query, 518 a.a., xylose transporter from Pseudomonas simiae WCS417

Subject, 502 a.a., ribonucleotide-diphosphate reductase subunit alpha from Pseudomonas simiae WCS417

 Score =  358 bits (919), Expect = e-103
 Identities = 209/483 (43%), Positives = 299/483 (61%), Gaps = 13/483 (2%)

Query: 8   LLQMNGIVKSFGGVNALNGIDIRVRPGECVGLCGENGAGKSTLMKVLSAVYPYGTWEGEI 67
           LL++  I K + GV AL  I+++V  GE   L GENGAGKSTLMK+L  V      EG+I
Sbjct: 4   LLKLENICKRYPGVQALKSINLQVERGEIHALLGENGAGKSTLMKILGGVEHQD--EGQI 61

Query: 68  LWDGQPLKAQSISETEAAGIVIIHQELTLVPDLSVAENIFMGHELTLPGGRMNYPAMFHR 127
           L DGQ  +  +  +  AAGI I+ QE +L+P L+  ENIF+GHEL+   G +    M   
Sbjct: 62  LIDGQAQQFATYRDAIAAGIGIVFQEFSLIPYLTAVENIFLGHELSNRFGLLRKREMVEA 121

Query: 128 AEALMRELKVPDMNVALPVSQYGGGYQQLVEIAKALNKQARLLILDEPSSALTRSEIEVL 187
           +EAL + L V  +++   V       QQ VEIAKAL   ARLL+LDEP++ LT SE E+L
Sbjct: 122 SEALFKRLGVT-IDLQCAVKHLSVAEQQFVEIAKALALDARLLVLDEPTATLTPSEAELL 180

Query: 188 LDIIRGLKAKGVACVYISHKLDEVAAVCDTIAVIRDGKHIATTAMADMDIAKIITQMVGR 247
            +I+R LK +GVA ++ISH L+E+  VCD I+V+RDG ++  T +AD DI  ++  MVGR
Sbjct: 181 FEIMRELKRQGVAVIFISHHLEEIFQVCDRISVLRDGGNVGVTDVADSDIDHLVEMMVGR 240

Query: 248 EMSNLYPTEP-HAVGEVIFEARNVTCHDVDNPKRKRVDDVSFVLKRGEILGIAGLVGAGR 306
            ++  +P +P    G ++ E +++    V N    R     F L +GEILG AGLVG+GR
Sbjct: 241 RLACSFPPKPTRERGPLLLEVKDIQL--VRNGPHNR-----FQLHKGEILGFAGLVGSGR 293

Query: 307 TELVSALFGAYPGRYSAEVWLDGQVIDTRTPLKSIRAGLCMVPEDRKRQGIIPDLGVGQN 366
           TEL   + GA P   S +VWL G+ I    P +++  G+ ++PE RK +G+I D  + +N
Sbjct: 294 TELALGMMGALPS-VSKDVWLRGEKITLDDPAQALAHGIGLLPESRKSEGLITDFSIREN 352

Query: 367 ITLTVLDSYAHRT-RIDAEAELGSIDQQIARMHLKTASTFLPITSLSGGNQQKAVLAKML 425
           I+L  L  Y + +  ID   E  S++  + ++ +K  S+   + +LSGGNQQK V+A+ +
Sbjct: 353 ISLNNLPKYQNASGLIDKNRECASVEGLMKQLSIKAPSSESRVFNLSGGNQQKVVIARWI 412

Query: 426 MAKPKVLILDEPTRGVDVGAKYEIYKLMGALAAEGVAIIMVSSELAEVLGVSDRVLVIGD 485
                VL+ DEPTRG+DVGAK +IY LM +L  +G AIIM+SSEL E++G+ DRV V   
Sbjct: 413 NHHCDVLVFDEPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSELPEIIGMCDRVAVFHK 472

Query: 486 GQL 488
           G +
Sbjct: 473 GAI 475