Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  151 bits (382), Expect = 2e-41
 Identities = 115/359 (32%), Positives = 173/359 (48%), Gaps = 67/359 (18%)

Query: 11  YKMLALVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIISGEIDLS 70
           Y  + LV+   V+ +         FLT  NLSN+ RQ+SI  I+A GM  VI++      
Sbjct: 33  YPFVGLVVVTLVMIL-----ASDTFLTASNLSNIARQVSINAIIAVGMTCVILT------ 81

Query: 71  VGSLLGLLGGLAAILDVVYHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVGLGGM 130
                   GG+              +LS+  +  L   L  G M A L  P   +G G +
Sbjct: 82  --------GGI--------------DLSVGPVMALSGTLTAGLMVAGLP-PGLAIGAGML 118

Query: 131 LAFRGILLGITGGTTIAPVSPSLVYVGQGYLPHSVGIGLGVLLFSLTVFLTWKQRRNRAL 190
           +   G+  GI  G  +A +    + V    +  + G+GL                     
Sbjct: 119 I---GVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGL--------------------- 154

Query: 191 HGLAAHSLVRDLVRVAVIGAVLAGFVTTLNSYDGIPVPVLLLLVLLGVFSYVTSQTVFGR 250
                  +  D   ++ +    A F     S  GI VP+L++L+   V   +   T  GR
Sbjct: 155 -------MYTDGYPISGLPDWFAFFGR--ESLFGIQVPILIMLLTYLVAYVLLQHTRIGR 205

Query: 251 RVYAVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNMGELDA 310
            +YA+G N EA RLSG+     KL ++GI G+  A+AGLV T+RL +G P+AG   ELDA
Sbjct: 206 YIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDA 265

Query: 311 IAACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSILVLAVWV 369
           IAA  +GG S+ GG G + G LLGA+++  L+NG++ML V  Y Q ++KG I++LA+++
Sbjct: 266 IAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFI 324