Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

 Score =  229 bits (583), Expect = 1e-64
 Identities = 141/381 (37%), Positives = 224/381 (58%), Gaps = 25/381 (6%)

Query: 12  KMLALVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIISGEIDLSV 71
           +++ + + +AV+ V FS  + G FL+P NL N+ +Q ++ GI++  MVL+I++  IDLSV
Sbjct: 17  RLVLMCVLLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVSTVMVLIIVARHIDLSV 76

Query: 72  GSLLGLLGGLAAILDVV----YHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVGL 127
           GS++G +G L A L       +    LA L++     L++ +  G++TA L +PSF+V L
Sbjct: 77  GSVMGFVGVLIAYLQYTSGWSWPTACLAGLAVA----LLVSIYQGWLTAVLGVPSFVVTL 132

Query: 128 GGMLAFRGILLGITGGTTIAPVSPSLVYVGQGYLPHSVGIGLGV------LLFSLTVFLT 181
           GG+++FRG    +  G T          +G GY     GIG+        L+ ++     
Sbjct: 133 GGLMSFRGAAFLVAEGKTQPVNDEFFQRLGGGY---DGGIGVTASWVIAGLVAAVLFARM 189

Query: 182 WKQRRNRALHGLAAHSLVRDLVRVAVIGAVLAGFVTTLNSY--------DGIPVPVLLLL 233
           +++R  RA H +    L  +L+  AV  AV+ GF   +N Y         GIP+PVL+  
Sbjct: 190 FQKRAARARHEMPNEPLWLELLLTAVPAAVVIGFAAVMNHYKIDSKDAPQGIPIPVLIWA 249

Query: 234 VLLGVFSYVTSQTVFGRRVYAVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTA 293
           V+  V S++  +T FGR V+A+G N +A  L GI V+ V L +F ++ V+  +A +V+ A
Sbjct: 250 VVAIVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLVTIAAIVSIA 309

Query: 294 RLAAGSPSAGNMGELDAIAACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSY 353
           RL AG+ S G   EL  IAA  IGGT++ GGSG+++G++LGAL++ SLD+GM +LDV   
Sbjct: 310 RLNAGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSGMLLLDVPIG 369

Query: 354 WQMIVKGSILVLAVWVDVSTR 374
            +M++ G +L++AV  DV  R
Sbjct: 370 KRMVIIGQVLIVAVVFDVLYR 390