Pairwise Alignments

Query, 378 a.a., D-xylose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 404 a.a., L-arabinose ABC transporter, permease protein AraH from Variovorax sp. SCN45

 Score =  266 bits (679), Expect = 1e-75
 Identities = 146/364 (40%), Positives = 215/364 (59%), Gaps = 8/364 (2%)

Query: 16  LVIAVAVIWVFFSWQTEGGFLTPRNLSNLLRQMSITGILACGMVLVIISGEIDLSVGSLL 75
           ++I++  I V F   T+G  L P NL+NLL Q S   I+A GM+LVI++G IDLSVGS+ 
Sbjct: 36  MLISLVAIMVLFQVLTDGTLLRPLNLTNLLLQNSYVVIMALGMLLVIVAGHIDLSVGSVC 95

Query: 76  GLLGGLAAILDVVYHIPLLANLSLVALCGLMIGLANGYMTAYLRIPSFIVGLGGMLAFRG 135
           G +G LAA+L V Y    +    +  L G +IG A G+  A+ +IPSFIV L GML F+G
Sbjct: 96  GFIGALAAVLMVEYDWHFVPTAIVSILAGAVIGAAQGWFVAFRKIPSFIVTLAGMLVFKG 155

Query: 136 ILLGITGGTTIAPVSPSLVYVGQGYLPHSVG--------IGLGVLLFSLTVFLTWKQRRN 187
           + L +  G ++ P       +  G++P  +G        + +G L     VF   + R  
Sbjct: 156 LTLALLAGQSVGPFPVEFQRLSSGFIPDPLGGDTLRITSLAVGALAAVALVFFKLRGRAR 215

Query: 188 RALHGLAAHSLVRDLVRVAVIGAVLAGFVTTLNSYDGIPVPVLLLLVLLGVFSYVTSQTV 247
            A HG+        LV+     A++  F   L++Y G+P  ++++ VL+ V+ +VT++T 
Sbjct: 216 LAAHGMETEPYAFFLVKNLFFAAIILFFSYLLSTYKGLPNVLVVMAVLIVVYDFVTNRTT 275

Query: 248 FGRRVYAVGSNMEATRLSGINVQAVKLWIFGIMGVMCALAGLVNTARLAAGSPSAGNMGE 307
            GRR+YA+G N +A RLSG+  Q +    F  MG + ALAGLV  ARL   +P AG   E
Sbjct: 276 IGRRIYALGGNEKAARLSGVKTQRLAFLTFVNMGALAALAGLVFAARLNTATPKAGLGFE 335

Query: 308 LDAIAACFIGGTSMRGGSGTVYGALLGALVITSLDNGMSMLDVDSYWQMIVKGSILVLAV 367
           LD IAACFIGG S  GG G V GA++GA ++  ++NGMS+L +   +Q ++KG +L+ AV
Sbjct: 336 LDVIAACFIGGASASGGVGRVMGAVIGAFIMGVMNNGMSILGIGIDYQQVIKGLVLLAAV 395

Query: 368 WVDV 371
           ++DV
Sbjct: 396 FIDV 399